RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ZNF417Q8TAU3 575 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 ABTB1Q969K4 478 aaPredicted RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 ZNF587Q96SQ5 575 aaPredicted RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 IFT27Q9BW83 186 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 TNFRSF10DQ9UBN6 386 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 NDRG4Q9ULP0 352 aaKnown RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 NPIPA5E9PKD4 350 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 C11orf98E9PRG8 122 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 DENRO43583 198 aaKnown RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 AKR7A3O95154 331 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 SMSP52788 366 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 SUCLG1P53597 346 aaKnown RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 PRPS1P60891 318 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 KEAP1Q14145 624 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 CMPK2Q5EBM0 449 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 ACSM5Q6NUN0 579 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 RPUSD3Q6P087 351 aaKnown RBP13.03□□□□□ -0.32
NPC1-207ENST00000588867 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 NPIPA1Q9UND3 350 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 TRAPPC4Q9Y296 219 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 HIF3AQ9Y2N7 669 aa13.03□□□□□ -0.32
NPC1-207ENST00000588867 F13BP05160 661 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 GGT2P36268 569 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 RPS4XP62701 263 aaKnown RBP13.02□□□□□ -0.33
NPC1-207ENST00000588867 SLC35A1P78382 337 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 CDK5Q00535 292 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 IL5RAQ01344 420 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 RPL18Q07020 188 aaKnown RBP13.02□□□□□ -0.33
NPC1-207ENST00000588867 SGCBQ16585 318 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 ALG10Q5BKT4 473 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 HBMQ6B0K9 141 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 CASP12Q6UXS9 341 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 H1FNTQ75WM6 255 aaPredicted RBP13.02□□□□□ -0.33
NPC1-207ENST00000588867 GGNQ86UU5 652 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 C8orf59Q8N0T1 100 aaPredicted RBP13.02□□□□□ -0.33
NPC1-207ENST00000588867 KDM8Q8N371 416 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 OR2T33Q8NG76 320 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 FAM81AQ8TBF8 368 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 UBE2FQ969M7 185 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 PNPLA2Q96AD5 504 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 MIB2Q96AX9 1013 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 APOL4Q9BPW4 351 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 ANKRD60Q9BZ19 345 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 MRPL39Q9NYK5 338 aaKnown RBP13.02□□□□□ -0.33
NPC1-207ENST00000588867 TAS2R5Q9NYW4 299 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 DNAJC13O75165 2243 aa13.02□□□□□ -0.33
NPC1-207ENST00000588867 MCIDASD6RGH6 385 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 PLPP3O14495 311 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 RNF13O43567 381 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 SERPINI2O75830 405 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 WISP2O76076 250 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 PPP1R3DO95685 299 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 PMS2P2O95744 297 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 ACTL6AO96019 429 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 SLC6A6P31641 620 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 EIF1AXP47813 144 aaKnown RBP13.01□□□□□ -0.33
NPC1-207ENST00000588867 LHX2P50458 406 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CARD18P57730 90 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CDC42P60953 191 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CSNK2A1P68400 391 aaPredicted RBP13.01□□□□□ -0.33
NPC1-207ENST00000588867 ANKDD1AQ495B1 522 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 ZNF691Q5VV52 312 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 SLX4IPQ5VYV7 408 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 ESPNLQ6ZVH7 1005 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 USP51Q70EK9 711 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CHERPQ8IWX8 916 aaKnown RBP13.01□□□□□ -0.33
NPC1-207ENST00000588867 TMEM99Q8N816 258 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 OR4Q3Q8NH05 313 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 PITX2Q99697 317 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 TEX12Q9BXU0 123 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 IMPAD1Q9NX62 359 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 M0R129 80 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 MYF6P23409 242 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 NOS3P29474 1203 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 UQCRC1P31930 480 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 MLLT10P55197 1068 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CTXN1P60606 82 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 MYBPC1Q00872 1141 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 IL18R1Q13478 541 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CTU2Q2VPK5 515 aaKnown RBP13.01□□□□□ -0.33
NPC1-207ENST00000588867 SLC35F1Q5T1Q4 408 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 KRT80Q6KB66 452 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 EXD3Q8N9H8 876 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 TEX19Q8NA77 164 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 SETD9Q8NE22 299 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 OR2V1Q8NHB1 315 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 ERMAPQ96PL5 475 aaPredicted RBP13.01□□□□□ -0.33
NPC1-207ENST00000588867 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 CHST11Q9NPF2 352 aa13.01□□□□□ -0.33
NPC1-207ENST00000588867 E9PQ18 207 aa13□□□□□ -0.33
NPC1-207ENST00000588867 CXCL13O43927 109 aa13□□□□□ -0.33
NPC1-207ENST00000588867 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
NPC1-207ENST00000588867 CRYABP02511 175 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms