RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FAM169BQ8N8A8 192 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 ZNF317Q96PQ6 595 aaPredicted RBP13.18□□□□□ -0.3
IFT20-216ENST00000588477 MOV10Q9HCE1 1003 aaKnown RBP13.18□□□□□ -0.3
IFT20-216ENST00000588477 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 USP22Q9UPT9 525 aa13.18□□□□□ -0.3
IFT20-216ENST00000588477 WNT9BO14905 357 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 G6PDP11413 515 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
IFT20-216ENST00000588477 CBR1P16152 277 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 EPHA1P21709 976 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 CXCR1P25024 350 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 ROR2Q01974 943 aaKnown RBP13.17□□□□□ -0.3
IFT20-216ENST00000588477 NPRL3Q12980 569 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 SNTB2Q13425 540 aaKnown RBP13.17□□□□□ -0.3
IFT20-216ENST00000588477 DAG1Q14118 895 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 PDLIM3Q53GG5 364 aaPredicted RBP13.17□□□□□ -0.3
IFT20-216ENST00000588477 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 KRT80Q6KB66 452 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 ZCCHC23Q6ZST2 131 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 TAPBPLQ9BX59 468 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 TREM2Q9NZC2 230 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 MID2Q9UJV3 735 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 ARHGAP32A7KAX9 2087 aa13.17□□□□□ -0.3
IFT20-216ENST00000588477 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
IFT20-216ENST00000588477 NPHS1O60500 1241 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 CPSF4O95639 269 aaKnown RBP13.16□□□□□ -0.3
IFT20-216ENST00000588477 GAAP10253 952 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 SAGP10523 405 aaPredicted RBP13.16□□□□□ -0.3
IFT20-216ENST00000588477 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
IFT20-216ENST00000588477 UQCRC2P22695 453 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 LIMS1P48059 325 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 P2RY4P51582 365 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 ARFIP2P53365 341 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 CLDN8P56748 225 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 HPCAP84074 193 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 BNIP2Q12982 314 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 PRR31Q5SQ13 230 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 C1orf229Q6ZS94 237 aaPredicted RBP13.16□□□□□ -0.3
IFT20-216ENST00000588477 C4orf33Q8N1A6 199 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 LINC00470Q9BZP3 86 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 NOX3Q9HBY0 568 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 CRLF2Q9HC73 371 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 PCDHGB1Q9Y5G3 927 aa13.16□□□□□ -0.3
IFT20-216ENST00000588477 LOC105371242A0A075B767 164 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 ZNF503-AS2A6NEH8 195 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 CFAP73A6NFT4 308 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 FAAHO00519 579 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 TMPRSS2O15393 492 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SYNGR3O43761 229 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 VAMP5O95183 116 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 PNPP00491 289 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 AVPP01185 164 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 TFP02787 698 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 HPXP02790 462 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 FAM153BP0C7A2 387 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 KRT4P19013 534 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 ACHEP22303 614 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 ARR3P36575 388 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
IFT20-216ENST00000588477 ARF1P84077 181 aaKnown RBP13.15□□□□□ -0.3
IFT20-216ENST00000588477 DEFA6Q01524 100 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
IFT20-216ENST00000588477 EPS8Q12929 822 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SYPL1Q16563 259 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SLC9B1Q4ZJI4 515 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 ANKRD46Q86W74 232 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 EPHX4Q8IUS5 362 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 TUBGCP3Q96CW5 907 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
IFT20-216ENST00000588477 RACGAP1Q9H0H5 632 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 MS4A5Q9H3V2 200 aa13.15□□□□□ -0.3
IFT20-216ENST00000588477 SMIM23A6NLE4 172 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 M0R233 179 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 C1QCP02747 245 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 CHRM4P08173 479 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 UQCRBP14927 111 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 IL7RP16871 459 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 CAPZA2P47755 286 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 CLDN17P56750 224 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 MSMPQ1L6U9 139 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 MRPL2Q5T653 305 aaKnown RBP13.14□□□□□ -0.31
IFT20-216ENST00000588477 PRAMEF8Q5VWM4 474 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 PRAMEF7Q5VXH5 474 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 MDP1Q86V88 176 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 KDM8Q8N371 416 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 ANKFN1Q8N957 763 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 IL17RDQ8NFM7 739 aa13.14□□□□□ -0.31
IFT20-216ENST00000588477 RDH5Q92781 318 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms