RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SCN2AQ99250 2005 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 CFAP47Q6ZTR5 3102 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF891A8MT65 544 aaPredicted RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 SMIM10L1P0DMW3 83 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 CD53P19397 219 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 FBLP22087 321 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 EFR3AQ14156 821 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 EXOSC6Q5RKV6 272 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 RPL13AP3Q6NVV1 102 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ZNF619Q8N2I2 560 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 OR4K14Q8NGD5 310 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 OR9A4Q8NGU2 314 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 KISS1RQ969F8 398 aaPredicted RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 KCTD12Q96CX2 325 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 SMIM10Q96HG1 83 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 SERINC2Q96SA4 455 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 SDF2Q99470 211 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 TIMP4Q99727 224 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 NIPAL2Q9H841 368 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 WDR54Q9H977 334 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 TRIM36Q9NQ86 728 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 ACOXLQ9NUZ1 547 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 BABAM2Q9NXR7 383 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 NLKQ9UBE8 527 aa13.38□□□□□ -0.27
CCDC43-203ENST00000588210 MRPS18BQ9Y676 258 aaKnown RBP13.38□□□□□ -0.27
CCDC43-203ENST00000588210 CENPVL1A0A0U1RR11 272 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 DVL2O14641 736 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 ORC5O43913 435 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 KLF7O75840 302 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 LYPD3O95274 346 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 DBIP07108 87 aaKnown RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 ELK1P19419 428 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 HTR2AP28223 471 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 INPP1P49441 399 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 SNRPNP63162 240 aaKnown RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 Q5BKY6 102 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 PAMR1Q6UXH9 720 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 PRSS41Q7RTY9 318 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 NR2C2APQ86WQ0 139 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 LRRC28Q86X40 367 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 LNX2Q8N448 690 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 YIPF7Q8N8F6 280 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 OR5M3Q8NGP4 307 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 HS6ST2Q96MM7 605 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 GON7Q9BXV9 100 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 PIGUQ9H490 435 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 EXTL2Q9UBQ6 330 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 NXT1Q9UKK6 140 aaKnown RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 SIRT4Q9Y6E7 314 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 CLCA3PQ9Y6N3 262 aa13.37□□□□□ -0.27
CCDC43-203ENST00000588210 ANKRD11Q6UB99 2663 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-203ENST00000588210 IGLV3-12A0A075B6K2 115 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 OR6C70A6NIJ9 312 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 GALR3O60755 368 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 C1QBP02746 253 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TBXA2RP21731 343 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 GZMKP49863 264 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CXADRP78310 365 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 FAPQ12884 760 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TRAM1Q15629 374 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 DEFB134Q4QY38 66 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TMEM99Q8N816 258 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 MKKSQ9NPJ1 570 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 VSTM2BA6NLU5 285 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 FMO6PO60774 539 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CPMP14384 443 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 MAKP20794 623 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 PTNP21246 168 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CTBP2P56545 445 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 RPS18P62269 152 aaKnown RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TNK1Q13470 666 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 GALEQ14376 348 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 GPR68Q15743 365 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 IDNKQ5T6J7 187 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 FHL5Q5TD97 284 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 VASH1Q7L8A9 365 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 PLCZ1Q86YW0 608 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 OR2Y1Q8NGV0 311 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 PFN4Q8NHR9 129 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TRIM63Q969Q1 353 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CREB3L1Q96BA8 519 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 NDEL1Q9GZM8 345 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TGIF2Q9GZN2 237 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CMC2Q9NRP2 79 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CYSLTR2Q9NS75 346 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 CTSFQ9UBX1 484 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 C19orf53Q9UNZ5 99 aaPredicted RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 TMEM5Q9Y2B1 443 aa13.36□□□□□ -0.27
CCDC43-203ENST00000588210 PTRH2Q9Y3E5 179 aaKnown RBP13.36□□□□□ -0.27
CCDC43-203ENST00000588210 A0A0G2JMP0 313 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 A0A0X1KG70 313 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 DAPL1A0PJW8 107 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 SLC22A31A6NKX4 558 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 RCBTB2O95199 551 aa13.35□□□□□ -0.27
CCDC43-203ENST00000588210 IFI30P13284 250 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms