RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PPOXP50336 477 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.45
DNMT1-213ENST00000587604 COPZ1P61923 177 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 LGALS3BPQ08380 585 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 BNIP2Q12982 314 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 CHI3L2Q15782 390 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 CR1LQ2VPA4 569 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 WBP2NLQ6ICG8 309 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF621Q6ZSS3 439 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 TEX37Q96LM6 180 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 SOX7Q9BT81 388 aa12.21□□□□□ -0.45
DNMT1-213ENST00000587604 A0A096LPE4 126 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 A0A1W2PPZ6 126 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 LRP5LA4QPB2 252 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 NR5A2O00482 541 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 BIRC5O15392 142 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 UPK3AO75631 287 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 IGKV3-15P01624 115 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 GKN3PP0CG01 181 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 CALCRP30988 508 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 CDKN2CP42773 168 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 SH3BGRP55822 239 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-213ENST00000587604 UFM1P61960 85 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 LRRC74AQ0VAA2 488 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 MAPK11Q15759 364 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 ZSWIM7Q19AV6 140 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 COX20Q5RI15 118 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 C1orf140Q5VVS0 124 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 OGFOD2Q6N063 350 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 LINGO2Q7L985 606 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 CADM2Q8N3J6 435 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 RFLNBQ8N5W9 214 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 NUP37Q8NFH4 326 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 OR52P1PQ8NH57 321 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-213ENST00000587604 HPS1Q92902 700 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 ALKBH3Q96Q83 286 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-213ENST00000587604 OR52E6Q96RD3 313 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 SORT1Q99523 831 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 DOK1Q99704 481 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 NUF2Q9BZD4 464 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 LINC00470Q9BZP3 86 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF442Q9H7R0 627 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 HAO1Q9UJM8 370 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 RASD1Q9Y272 281 aa12.2□□□□□ -0.46
DNMT1-213ENST00000587604 A0A096LPI6 279 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 NPIPB7O75200 414 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 KRT75O95678 551 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 GSNP06396 782 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 ERCC1P07992 297 aaPredicted RBP12.19□□□□□ -0.46
DNMT1-213ENST00000587604 TACSTD2P09758 323 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 DAOP14920 347 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 SLC1A6P48664 564 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 CHN2P52757 468 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 NME5P56597 212 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 TUBA1BP68363 451 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 TUBA4AP68366 448 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 HGFACQ04756 655 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 LIN52Q52LA3 116 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF836Q6ZNA1 936 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 TUBA1AQ71U36 451 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 VRK2Q86Y07 508 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 ANKK1Q8NFD2 765 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 PNPT1Q8TCS8 783 aaKnown RBP12.19□□□□□ -0.46
DNMT1-213ENST00000587604 STK35Q8TDR2 534 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 NELFAQ9H3P2 528 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 MEAF6Q9HAF1 191 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 CALML5Q9NZT1 146 aa12.19□□□□□ -0.46
DNMT1-213ENST00000587604 DSPPQ9NZW4 1301 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 TMEM229AB2RXF0 380 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 RPL36A-HNRNPH2H7BZ11 118 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 hCG_2039718K7EN88 272 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 FRS3O43559 492 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 TCF21O43680 179 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 LILRA1O75019 489 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 ALDOCP09972 364 aaKnown RBP12.18□□□□□ -0.46
DNMT1-213ENST00000587604 CBR1P16152 277 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 NPR2P20594 1047 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 IL12AP29459 219 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 THBS4P35443 961 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
DNMT1-213ENST00000587604 RNF220Q5VTB9 566 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF786Q8N393 782 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 LINC01356Q8N9X3 169 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 MFSD8Q8NHS3 518 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 ANKRD27Q96NW4 1050 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 TMEM109Q9BVC6 243 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 SEC61A2Q9H9S3 476 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 AIG1Q9NVV5 245 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 P2RX2Q9UBL9 471 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 TMEFF2Q9UIK5 374 aaPredicted RBP12.18□□□□□ -0.46
DNMT1-213ENST00000587604 ZNF232Q9UNY5 417 aa12.18□□□□□ -0.46
DNMT1-213ENST00000587604 PCDHB14Q9Y5E9 798 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms