RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NIPAL3Q6P499 406 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF440Q8IYI8 595 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 OR1K1Q8NGR3 316 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 MAL2Q969L2 176 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 OR52B2Q96RD2 323 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 RSPO3Q9BXY4 272 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 NELFAQ9H3P2 528 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 TPT1P8Q9HAU6 139 aa13.24□□□□□ -0.29
PRKCSH-204ENST00000587290 A8MVM7 634 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM229AB2RXF0 380 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF587BE7ETH6 402 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC22A3O75751 556 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 ANP32DO95626 131 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 IFNA2P01563 188 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 CELA3BP08861 270 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 FAM157CP0CG43 387 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 DSCR9P59020 149 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 CHRNB3Q05901 458 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 GSTA3Q16772 222 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SWI5Q1ZZU3 235 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 PDCD4Q53EL6 469 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 C6orf10Q5SRN2 563 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 RNF220Q5VTB9 566 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 CREB3L2Q70SY1 520 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 COMTD1Q86VU5 262 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 POMGNT2Q8NAT1 580 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC25A36Q96CQ1 311 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC38A2Q96QD8 506 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SF3B5Q9BWJ5 86 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 TAPBPLQ9BX59 468 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 CHODLQ9H9P2 273 aa13.23□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 NPIPB7O75200 414 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 SEC14L2O76054 403 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 WNT11O96014 354 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 CECR9P0C854 216 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 PNMTP11086 282 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 IDO1P14902 403 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 USF1P22415 310 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 IGFBP5P24593 272 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 CALCRP30988 508 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 RPS5P46782 204 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 CRISP3P54108 245 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 COPZ1P61923 177 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 EGR4Q05215 589 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 GLB1L3Q8NCI6 653 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 BCL2L2Q92843 193 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 VRK1Q99986 396 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 CA10Q9NS85 328 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 THAP1Q9NVV9 213 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 TMEM45AQ9NWC5 275 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 CDC42EP3Q9UKI2 254 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 PMF1-BGLAPU3KQ54 211 aa13.22□□□□□ -0.29
PRKCSH-204ENST00000587290 IGHV4-61A0A0C4DH41 118 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF503-AS2A6NEH8 195 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 TRPC5OSA6NMA1 111 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 FTCDNL1E5RQL4 147 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 AHSA1O95433 338 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 F12P00748 615 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 IL6P05231 212 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 CBLP22681 906 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 MAP2K6P52564 334 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 CLDN17P56750 224 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 UBE2NP61088 152 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 TXNL4AP83876 142 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 ROR2Q01974 943 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 NAAAQ02083 359 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 CYB5R2Q6BCY4 276 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC2A7Q6PXP3 512 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 SLC46A3Q7Z3Q1 461 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 C10orf111Q8N326 155 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 ZNF837Q96EG3 531 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 MAELQ96JY0 434 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 FOXN4Q96NZ1 517 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 PRR14Q9BWN1 585 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 SPATA9Q9BWV2 254 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 BEX2Q9BXY8 128 aa13.21□□□□□ -0.29
PRKCSH-204ENST00000587290 VWC2LB2RUY7 222 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 OR4A8P0C604 315 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ZCCHC18P0CG32 403 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 BMP4P12644 408 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 HTR2AP28223 471 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 SERPINF1P36955 418 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 NR4A2P43354 598 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 PDLIM4P50479 330 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 POLR2JP52435 117 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 SNRPD2P62316 118 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 LRRC74AQ0VAA2 488 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ADIPOQQ15848 244 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ZNF311Q5JNZ3 666 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ANKRD16Q6P6B7 361 aa13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ABHD12BQ7Z5M8 362 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-204ENST00000587290 ZCCHC24Q8N2G6 241 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms