RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PARPBPQ9NWS1 579 aa10.12□□□□□ -0.79
LIG3-207ENST00000586119 KLHL14Q9P2G3 628 aa10.12□□□□□ -0.79
LIG3-207ENST00000586119 TRIM33Q9UPN9 1127 aa10.12□□□□□ -0.79
LIG3-207ENST00000586119 SLC9A8Q9Y2E8 581 aa10.12□□□□□ -0.79
LIG3-207ENST00000586119 ANK2Q01484 3957 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 A0A096LPE4 126 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 A0A1W2PPZ6 126 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 LIPT2A6NK58 231 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 UBDO15205 165 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 ZNF208O43345 1280 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 DNPH1O43598 174 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 TGFAP01135 160 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 CELA3BP08861 270 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 PRG2P13727 222 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 APEHP13798 732 aaKnown RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 IDO1P14902 403 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 IL2RGP31785 369 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 ACAA2P42765 397 aaKnown RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 SLC1A3P43003 542 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 MRPL19P49406 292 aaKnown RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 GZMKP49863 264 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 KHKP50053 298 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 GYS2P54840 703 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 EPS8Q12929 822 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 FAM174BQ3ZCQ3 159 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 IQCCQ4KMZ1 466 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 MRPL2Q5T653 305 aaKnown RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 FAM166AQ6J272 317 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 PAQR6Q6TCH4 344 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 GPAT4Q86UL3 456 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 MYPOPQ86VE0 399 aaPredicted RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 VRK2Q86Y07 508 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 C17orf78Q8N4C9 275 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 C1orf162Q8NEQ5 155 aaPredicted RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 OR1K1Q8NGR3 316 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 BCL2L2Q92843 193 aaPredicted RBP10.11□□□□□ -0.79
LIG3-207ENST00000586119 TMEM45BQ96B21 275 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 OR52B2Q96RD2 323 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 BPESC1Q9GZL8 116 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 SLC6A13Q9NSD5 602 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 AIG1Q9NVV5 245 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 LPAR3Q9UBY5 353 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 KCNS2Q9ULS6 477 aa10.11□□□□□ -0.79
LIG3-207ENST00000586119 A0A0G2JND7 137 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CFAP73A6NFT4 308 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CCDC154A6NI56 674 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 EIF1BO60739 113 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 AGR2O95994 175 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 C8BP07358 591 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 IGFBP1P08833 259 aaPredicted RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 CSF3P09919 207 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ALDOCP09972 364 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 RPS4Y1P22090 263 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 FKBP2P26885 142 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 S100A3P33764 101 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 SERPINF1P36955 418 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 HTR3AP46098 478 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ATP4BP51164 291 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ARFIP2P53365 341 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CLNS1AP54105 237 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 HGFACQ04756 655 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ADIPOQQ15848 244 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 DPY19L1Q2PZI1 675 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 PDCD4Q53EL6 469 aaKnown RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 ANXA8L1Q5VT79 327 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CGB2Q6NT52 195 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ANKRD16Q6P6B7 361 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ZNF621Q6ZSS3 439 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CREB3L2Q70SY1 520 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CPLX4Q7Z7G2 160 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 EPHX4Q8IUS5 362 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CLIP4Q8N3C7 705 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CADM2Q8N3J6 435 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 GLB1L3Q8NCI6 653 aaPredicted RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 WDR60Q8WVS4 1066 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 PMM1Q92871 262 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 TESCQ96BS2 214 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 SLC38A2Q96QD8 506 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 EBF4Q9BQW3 602 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 TMEM120AQ9BXJ8 343 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 NELFAQ9H3P2 528 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 SDR39U1Q9NRG7 319 aaPredicted RBP10.1□□□□□ -0.79
LIG3-207ENST00000586119 CA10Q9NS85 328 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 ADPRHL2Q9NX46 363 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 CHST2Q9Y4C5 530 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 GPR45Q9Y5Y3 372 aa10.1□□□□□ -0.79
LIG3-207ENST00000586119 TMEM129A0AVI4 362 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 ZNF503-AS2A6NEH8 195 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 AQP7P3A6NL99 342 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 SHOX2O60902 331 aaPredicted RBP10.09□□□□□ -0.79
LIG3-207ENST00000586119 STAMBPO95630 424 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 WNT11O96014 354 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 OR4A8P0C604 315 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 CECR9P0C854 216 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 NR2F1P10589 423 aa10.09□□□□□ -0.79
LIG3-207ENST00000586119 BMP4P12644 408 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms