RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 RPS4XP62701 263 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 MMEL1Q495T6 779 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 ALG10BQ5I7T1 473 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 C1QTNF12Q5T7M4 302 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 INTS11Q5TA45 600 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 TSPO2Q5TGU0 170 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 FAM91A1Q658Y4 838 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 C6orf89Q6UWU4 347 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 NET1Q7Z628 596 aaPredicted RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 YTHDF3Q7Z739 585 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 DEPDC4Q8N2C3 294 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 C10orf111Q8N326 155 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 C17orf78Q8N4C9 275 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 MUS81Q96NY9 551 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 EPYCQ99645 322 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 SH3GL1Q99961 368 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 NSRP1Q9H0G5 558 aaKnown RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 SLCO5A1Q9H2Y9 848 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 SLC7A10Q9NS82 523 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 FAIMQ9NVQ4 179 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 LAMP3Q9UQV4 416 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 AMDHD2Q9Y303 409 aa10.9□□□□□ -0.66
SS18-225ENST00000585121 MAGED1Q9Y5V3 778 aaPredicted RBP10.9□□□□□ -0.66
SS18-225ENST00000585121 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.67
SS18-225ENST00000585121 TRAV36DV7A0A075B6V5 113 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 DPRXA6NFQ7 191 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 NDUFAB1O14561 156 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 AIM2O14862 343 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ZNF43P17038 809 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 PTAFRP25105 342 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 IL1RL1Q01638 556 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 MFSD13AQ14CX5 517 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 MAPRE2Q15555 327 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ADRM1Q16186 407 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 GABRA6Q16445 453 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 FAM69AQ5T7M9 428 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 KLHL24Q6TFL4 600 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 PATL1Q86TB9 770 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 BIVMQ86UB2 503 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ZIC4Q8N9L1 334 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 C1orf162Q8NEQ5 155 aaPredicted RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 SLC26A7Q8TE54 656 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 SMAP2Q8WU79 429 aaPredicted RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 KTI12Q96EK9 354 aaPredicted RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 TRMT61AQ96FX7 289 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 C18orf12Q96KH6 178 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ZNF385AQ96PM9 386 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ALG2Q9H553 416 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 DSCAMO60469 2012 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 FAM171A2A8MVW0 826 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ZNF587BE7ETH6 402 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 M0QX08 132 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ABCD4O14678 606 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 TPST1O60507 370 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 MFN2O95140 757 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 WNT11O96014 354 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 PAX1P15863 534 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 DRD4P21917 467 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ZNF83P51522 516 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 CDH11P55287 796 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 ATP5J2P56134 94 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 OR1Q1Q15612 314 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 GLIPR1L2Q4G1C9 344 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 NIPAL3Q6P499 406 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 PIGWQ7Z7B1 504 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 RETREG3Q86VR2 466 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 PTOV1Q86YD1 416 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 SMYD1Q8NB12 490 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 KBTBD8Q8NFY9 601 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 Q96MF0 132 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 KAT8Q9H7Z6 458 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 DLL4Q9NR61 685 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 FGFR1OP2Q9NVK5 253 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 CISD1Q9NZ45 108 aaKnown RBP10.89□□□□□ -0.67
SS18-225ENST00000585121 POU2F3Q9UKI9 436 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 SLC25A15Q9Y619 301 aa10.89□□□□□ -0.67
SS18-225ENST00000585121 A0A1W2PR80 420 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 FTCDNL1E5RQL4 147 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 M0R1B8 84 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 PDLIM1O00151 329 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 AKAP8O43823 692 aaKnown RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 C8BP07358 591 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 INHBBP09529 407 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 CDH2P19022 906 aaPredicted RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 PAX7P23759 505 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 HTR2AP28223 471 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 P2RY4P51582 365 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 PCBP3P57721 371 aaKnown RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 PRPS1P60891 318 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 EGR4Q05215 589 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 DMTNQ08495 405 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 SELPLGQ14242 412 aa10.88□□□□□ -0.67
SS18-225ENST00000585121 TRMT5Q32P41 509 aaKnown RBP10.88□□□□□ -0.67
SS18-225ENST00000585121 SWT1Q5T5J6 900 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms