RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CREB3L1Q96BA8 519 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF559Q9BR84 538 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MESP1Q9BRJ9 268 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DDA1Q9BW61 102 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CYSLTR2Q9NS75 346 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RABL2AQ9UBK7 228 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RABL2BQ9UNT1 228 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 KNTC1P50748 2209 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FAM240BA0A1B0GVZ2 78 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SYNDIG1LA6NDD5 238 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C9J4A7 227 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CDC42EP2O14613 210 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DKK1O94907 266 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 IGKV3-11P04433 115 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TALDO1P37837 337 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 INPP1P49441 399 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC37A1P57057 533 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 POU6F2P78424 691 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FAM69BQ5VUD6 431 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FIGNL1Q6PIW4 674 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FAM198BQ6UWH4 519 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PAMR1Q6UXH9 720 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPSR1Q6W5P4 371 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SHFQ7M4L6 423 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PLCZ1Q86YW0 608 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MS4A15Q8N5U1 240 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ALG8Q9BVK2 526 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MFRPQ9BY79 579 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 WDR54Q9H977 334 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RPRD1BQ9NQG5 326 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FBXO34Q9NWN3 711 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PRODH2Q9UF12 536 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC35A3Q9Y2D2 325 aa13.7□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DAPL1A0PJW8 107 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C9orf172C9J069 976 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TBXA2RP21731 343 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RBMS1P29558 406 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RCVRNP35243 200 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CD79BP40259 229 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RBM34P42696 430 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR1Q1Q15612 314 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NNATQ16517 81 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZNF791Q3KP31 576 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MEX3DQ86XN8 651 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GRAMD2AQ8IUY3 354 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SIRT6Q8N6T7 355 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR4N2Q8NGD1 307 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ART5Q96L15 291 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NUDT9Q9BW91 350 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RNF32Q9H0A6 362 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ING3Q9NXR8 418 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NUFIP1Q9UHK0 495 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MED31Q9Y3C7 131 aa13.69□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ANKRD61A6NGH8 418 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PRR23D1E9PI22 279 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SOCS6O14544 535 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PRKNO60260 465 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TMEM127O75204 238 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 LYPD3O95274 346 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PRR23D2P0DMB1 279 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CT45A8P0DMV1 189 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CT45A9P0DMV2 189 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ATP12AP54707 1039 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 FOXK2Q01167 660 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 RIPPLY1Q0D2K3 151 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 GPR68Q15743 365 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TATDN3Q17R31 274 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 YIF1BQ5BJH7 314 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CT45A2Q5DJT8 189 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C6orf15Q6UXA7 325 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 ZFP41Q8N8Y5 198 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR51G2Q8NGK0 314 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OR5W2Q8NH69 310 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SLC46A1Q96NT5 459 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TEAD3Q99594 435 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TMEM246Q9BRR3 403 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NXT1Q9UKK6 140 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 NPFFR2Q9Y5X5 522 aa13.68□□□□□ -0.22
CDK5RAP3-236ENST00000584991 LINC00854A0A1B0GVQ3 168 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PIP5K1CO60331 668 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 PTP4A3O75365 173 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 SERPINA3P01011 423 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 C1QBP02746 253 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 CD1AP06126 327 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 IFI30P13284 250 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 DRD5P21918 477 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 HOXC5Q00444 222 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TNK1Q13470 666 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 P2RY14Q15391 338 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 MRPL2Q5T653 305 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TMEM164Q5U3C3 297 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 TIPARPQ7Z3E1 657 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 OAFQ86UD1 273 aa13.67□□□□□ -0.22
CDK5RAP3-236ENST00000584991 BBS1Q8NFJ9 593 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms