RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 CLCF1Q9UBD9 225 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 ERRFI1Q9UJM3 462 aaPredicted RBP13.91□□□□□ -0.18
SS18-216ENST00000580751 POFUT2Q9Y2G5 429 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 MED31Q9Y3C7 131 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 LRRC42Q9Y546 428 aa13.91□□□□□ -0.18
SS18-216ENST00000580751 MYO7BQ6PIF6 2116 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 A0A1W2PNR3 127 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 MBD3L4A6NDZ8 208 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 MBD3L3A6NE82 208 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 MBD3L5A6NJ08 208 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 DNPH1O43598 174 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 OR10H3O60404 316 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 AGFG2O95081 481 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 SYNGR4O95473 234 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 PMS2P2O95744 297 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 GLI4P10075 376 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 IGFBP5P24593 272 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 TIMP3P35625 211 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 DIO1P49895 249 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 RPS6KA3P51812 740 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 CTBP2P56545 445 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 RAC3P60763 192 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 MYBPHQ13203 477 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 PON3Q15166 354 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 TTC33Q6PID6 262 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 TBPL2Q6SJ96 375 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 TMPPEQ6ZT21 453 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 P4HA3Q7Z4N8 544 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 CDK20Q8IZL9 346 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 RPRMLQ8N4K4 120 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 MARVELD2Q8N4S9 558 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 MBD3L2Q8NHZ7 208 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 PIGXQ8TBF5 258 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 GNPDA2Q8TDQ7 276 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 RND1Q92730 232 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 OSTF1Q92882 214 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 ZHX1-C8orf76Q96EF9 292 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 CCDC120Q96HB5 630 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 ZNF845Q96IR2 970 aaPredicted RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 ZFP3Q96NJ6 502 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 FEVQ99581 238 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 Q9H521 79 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 RAB26Q9ULW5 256 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 TRAPPC4Q9Y296 219 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 PCNX1Q96RV3 2341 aa13.9□□□□□ -0.18
SS18-216ENST00000580751 PHF3Q92576 2039 aaKnown RBP13.9□□□□□ -0.18
SS18-216ENST00000580751 ZC3H12DA2A288 527 aaKnown RBP13.89□□□□□ -0.19
SS18-216ENST00000580751 H0YAE9 185 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 SULT2B1O00204 365 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 NPIPB7O75200 414 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 AHSA1O95433 338 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 IL2RAP01589 272 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 FPR3P25089 353 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 IDUAP35475 653 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 DAPP51397 102 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 SMSP52788 366 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 UGT2B15P54855 530 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 NUP107P57740 925 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 PRKCDQ05655 676 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 PMPCAQ10713 525 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 SEC23BQ15437 767 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 ZNF239Q16600 458 aaKnown RBP13.89□□□□□ -0.19
SS18-216ENST00000580751 RIPPLY2Q5TAB7 128 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 C1orf140Q5VVS0 124 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 OR2A2Q6IF42 318 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 TMPRSS11FQ6ZWK6 438 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 SLC43A2Q8N370 569 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 FAM26EQ8N5C1 309 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 AQP11Q8NBQ7 271 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 FNDC9Q8TBE3 224 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 ARL5BQ96KC2 179 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 PRRG4Q9BZD6 226 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
SS18-216ENST00000580751 KRT84Q9NSB2 600 aa13.89□□□□□ -0.19
SS18-216ENST00000580751 TMEFF2Q9UIK5 374 aaPredicted RBP13.89□□□□□ -0.19
SS18-216ENST00000580751 SPTAN1Q13813 2472 aaKnown RBP13.89□□□□□ -0.19
SS18-216ENST00000580751 ACADSP16219 412 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 PRKACGP22612 351 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 OMPP47874 163 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 AQP4P55087 323 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 ESRRGP62508 458 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 SLC35A1P78382 337 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
SS18-216ENST00000580751 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 ANKDD1AQ495B1 522 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 TTC23Q5W5X9 447 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 SEM1Q6ZVN7 128 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 ZER1Q7Z7L7 766 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 CLDN22Q8N7P3 220 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 C9orf106Q8NAJ2 232 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 TAPBPLQ9BX59 468 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 GABARAPL3Q9BY60 117 aa13.88□□□□□ -0.19
SS18-216ENST00000580751 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms