RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
SKA2-205ENST00000580541 ORC6Q9Y5N6 252 aa12.8□□□□□ -0.36
SKA2-205ENST00000580541 NBEAQ8NFP9 2946 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 UNC119BA6NIH7 251 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 FTCDNL1E5RQL4 147 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 H0YC42 278 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 BLOC1S5-TXNDC5H3BN57 136 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 GPR171O14626 319 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 FZD7O75084 574 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 GASTP01350 101 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 IL2RAP01589 272 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 ASAH2BP0C7U1 165 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 GRPRP30550 384 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 IST1P53990 364 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 TPD52P55327 224 aaPredicted RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 H3F3AP84243 136 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 IL1RL1Q01638 556 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 SLC34A1Q06495 639 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 PPP1R8Q12972 351 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 PDK3Q15120 406 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 HMBOX1Q6NT76 420 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 PGBD2Q6P3X8 592 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 MTFR2Q6P444 385 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 CD300LDQ6UXZ3 194 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 B3GNT6Q6ZMB0 384 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 FCRLAQ7L513 359 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 FGD2Q7Z6J4 655 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 ZER1Q7Z7L7 766 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 DOLPP1Q86YN1 238 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 CHERPQ8IWX8 916 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 RBM4BQ9BQ04 359 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 RBM4Q9BWF3 364 aaKnown RBP12.79□□□□□ -0.36
SKA2-205ENST00000580541 VCXQ9H320 206 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 VNN3Q9NY84 501 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 EMC3Q9P0I2 261 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 OAZ3Q9UMX2 235 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 BSNQ9UPA5 3926 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 FAM208BQ5VWN6 2430 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 SHANK1Q9Y566 2161 aa12.79□□□□□ -0.36
SKA2-205ENST00000580541 TRGV8A0A0C4DH27 118 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 AQP7P3A6NL99 342 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 E9PLN8 166 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 M0R082 166 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 PLPP3O14495 311 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 CYTIPO60759 359 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 AKR7A3O95154 331 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 ADORA3P0DMS8 318 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ZNF43P17038 809 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 CDH2P19022 906 aaPredicted RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 MAKP20794 623 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 PTNP21246 168 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 CBLP22681 906 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 AHCYP23526 432 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 TIMP3P35625 211 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 GPR4P46093 362 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 PER3P56645 1201 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 PUDPQ08623 228 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 RASGEF1BQ0VAM2 473 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ZP4Q12836 540 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 C1DQ13901 141 aaKnown RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 ESPL1Q14674 2120 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 C3AR1Q16581 482 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 ZNF770Q6IQ21 691 aaPredicted RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ADGRE4PQ86SQ3 457 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 TMEM99Q8N816 258 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 RELTQ969Z4 430 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 OXGR1Q96P68 337 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 MOGAT1Q96PD6 335 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 ZNF587Q96SQ5 575 aaPredicted RBP12.78□□□□□ -0.36
SKA2-205ENST00000580541 VKORC1Q9BQB6 163 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 TEX12Q9BXU0 123 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 UCK2Q9BZX2 261 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 RASSF4Q9H2L5 321 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 NOX1Q9Y5S8 564 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 IGSF10Q6WRI0 2623 aa12.78□□□□□ -0.36
SKA2-205ENST00000580541 POLEQ07864 2286 aa12.77□□□□□ -0.36
SKA2-205ENST00000580541 RNF13O43567 381 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 AKAP8O43823 692 aaKnown RBP12.77□□□□□ -0.37
SKA2-205ENST00000580541 PIP5K1CO60331 668 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 PRB1P04280 392 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 CRHP06850 196 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 STSP08842 583 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 POU2F1P14859 743 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 FUT4P22083 530 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 PRKACGP22612 351 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 CA7P43166 264 aa12.77□□□□□ -0.37
SKA2-205ENST00000580541 GSSP48637 474 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms