RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 BTBD16Q32M84 506 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 STPG1Q5TH74 334 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 KANSL1Q7Z3B3 1105 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SLC35F2Q8IXU6 374 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ZNF671Q8TAW3 534 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 PIGKQ92643 395 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 DGAT2Q96PD7 388 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 TGM7Q96PF1 710 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ELF4Q99607 663 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 ZNF426Q9BUY5 554 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 LRRC61Q9BV99 259 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 JAM3Q9BX67 310 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 TRIM2Q9C040 744 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 TSPAN10Q9H1Z9 355 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SEMA6CQ9H3T2 930 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 PRTFDC1Q9NRG1 225 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SOHLH2Q9NX45 425 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 POMT2Q9UKY4 750 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 MPDZO75970 2070 aa9.6□□□□□ -0.87
TOP3A-209ENST00000580095 SHOXO15266 292 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NDUFB2O95178 105 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 FCER2P06734 321 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NUDT1P36639 197 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 LTBRP36941 435 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RABIFP47224 123 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 OR1D4P47884 311 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NRG3P56975 720 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RRAS2P62070 204 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SIRPAP78324 504 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 GPLD1P80108 840 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 PON3Q15166 354 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ARHGAP11AQ6P4F7 1023 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ULK3Q6PHR2 472 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 METAP1DQ6UB28 335 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 APOOLQ6UXV4 268 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 PXKQ7Z7A4 578 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SIAH3Q8IW03 269 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 GPALPP1Q8IXQ4 340 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CEP76Q8TAP6 659 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ASB12Q8WXK4 309 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SGTBQ96EQ0 304 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CNN2Q99439 309 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SPRTNQ9H040 489 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 Q9N2J8 555 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 PNO1Q9NRX1 252 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 MSRAQ9UJ68 235 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CLDN16Q9Y5I7 305 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 TVP23AA6NH52 213 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 PRAMEF26H0Y7S4 382 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 DCTN6O00399 190 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RNH1P13489 461 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NPR2P20594 1047 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 HLA-DMAP28067 261 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SLC6A1P30531 599 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SOX2P48431 317 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RPS11P62280 158 aaKnown RBP eCLIP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 YPEL5P62699 121 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RPL13AP3Q6NVV1 102 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ZCCHC12Q6PEW1 402 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 TMEM184AQ6ZMB5 413 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 FAM109AQ8N4B1 249 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 LGALS14Q8TCE9 139 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 PHOSPHO1Q8TCT1 267 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 OR8D2Q9GZM6 311 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 OR10A5Q9H207 317 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NOX4Q9NPH5 578 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 MKKSQ9NPJ1 570 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 C14orf105Q9NVL8 296 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 NCDNQ9UBB6 729 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 TP53BP1Q12888 1972 aaPredicted RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 KHNYNO15037 678 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SC5DO75845 299 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 AK1P00568 194 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 EPXP11678 715 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SPI1P17947 270 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 DRD1P21728 446 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 AHCYP23526 432 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CDKN2AP42771 156 aaKnown RBP9.59□□□□□ -0.87
TOP3A-209ENST00000580095 GPR3P46089 330 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CDK5R1Q15078 307 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 SLC36A2Q495M3 483 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 YIF1BQ5BJH7 314 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 LEG1Q6P5S2 330 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 MED25Q71SY5 747 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ARHGEF39Q8N4T4 335 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 OR8K3Q8NH51 312 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 DEDD2Q8WXF8 326 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ACOT12Q8WYK0 555 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CITED4Q96RK1 184 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 RTN4RQ9BZR6 473 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 ZNF222Q9UK12 451 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 KLHDC2Q9Y2U9 406 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 CACNG2Q9Y698 323 aa9.59□□□□□ -0.87
TOP3A-209ENST00000580095 COL6A3P12111 3177 aa9.58□□□□□ -0.88
TOP3A-209ENST00000580095 IGKV1D-42A0A075B6H8 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms