RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 NCALDP61601 193 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 SNRPD2P62316 118 aaKnown RBP12.01□□□□□ -0.49
GGA3-208ENST00000579743 IRX1P78414 480 aaPredicted RBP12.01□□□□□ -0.49
GGA3-208ENST00000579743 IL1RL1Q01638 556 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 BNIP2Q12982 314 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 RGNQ15493 299 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 CHRFAM7AQ494W8 412 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 SLC9B1Q4ZJI4 515 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 NIPAL3Q6P499 406 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 VPS33AQ96AX1 596 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 SLC25A36Q96CQ1 311 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 BOD1Q96IK1 185 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 ZNF385AQ96PM9 386 aaKnown RBP12.01□□□□□ -0.49
GGA3-208ENST00000579743 TNFRSF13CQ96RJ3 184 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 BCL2L10Q9HD36 194 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 A4GALTQ9NPC4 353 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 CORO2BQ9UQ03 480 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
GGA3-208ENST00000579743 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
GGA3-208ENST00000579743 FRS3O43559 492 aa12□□□□□ -0.49
GGA3-208ENST00000579743 SLC43A1O75387 559 aa12□□□□□ -0.49
GGA3-208ENST00000579743 C1QCP02747 245 aa12□□□□□ -0.49
GGA3-208ENST00000579743 VIMP08670 466 aaKnown RBP12□□□□□ -0.49
GGA3-208ENST00000579743 PNMTP11086 282 aa12□□□□□ -0.49
GGA3-208ENST00000579743 ETS2P15036 469 aa12□□□□□ -0.49
GGA3-208ENST00000579743 MVDP53602 400 aa12□□□□□ -0.49
GGA3-208ENST00000579743 FOXG1P55316 489 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 LOXL1Q08397 574 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 SPOCK1Q08629 439 aa12□□□□□ -0.49
GGA3-208ENST00000579743 MFSD13AQ14CX5 517 aa12□□□□□ -0.49
GGA3-208ENST00000579743 RPS26P11Q5JNZ5 115 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 ANKRD16Q6P6B7 361 aa12□□□□□ -0.49
GGA3-208ENST00000579743 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
GGA3-208ENST00000579743 NET1Q7Z628 596 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 SERPINA11Q86U17 422 aa12□□□□□ -0.49
GGA3-208ENST00000579743 HIPK1Q86Z02 1210 aa12□□□□□ -0.49
GGA3-208ENST00000579743 CLIP4Q8N3C7 705 aa12□□□□□ -0.49
GGA3-208ENST00000579743 GPR137CQ8N3F9 429 aa12□□□□□ -0.49
GGA3-208ENST00000579743 ZIC4Q8N9L1 334 aa12□□□□□ -0.49
GGA3-208ENST00000579743 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
GGA3-208ENST00000579743 BHLHE22Q8NFJ8 381 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 OR10H5Q8NGA6 315 aa12□□□□□ -0.49
GGA3-208ENST00000579743 DNAJA4Q8WW22 397 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 PROX1Q92786 737 aa12□□□□□ -0.49
GGA3-208ENST00000579743 SLC38A4Q969I6 547 aa12□□□□□ -0.49
GGA3-208ENST00000579743 C3orf49Q96BT1 292 aa12□□□□□ -0.49
GGA3-208ENST00000579743 SLC38A2Q96QD8 506 aa12□□□□□ -0.49
GGA3-208ENST00000579743 ZNF607Q96SK3 696 aa12□□□□□ -0.49
GGA3-208ENST00000579743 KATNB1Q9BVA0 655 aa12□□□□□ -0.49
GGA3-208ENST00000579743 LINC00470Q9BZP3 86 aa12□□□□□ -0.49
GGA3-208ENST00000579743 HEATR1Q9H583 2144 aaKnown RBP12□□□□□ -0.49
GGA3-208ENST00000579743 EVA1AQ9H8M9 152 aa12□□□□□ -0.49
GGA3-208ENST00000579743 C12orf10Q9HB07 376 aa12□□□□□ -0.49
GGA3-208ENST00000579743 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
GGA3-208ENST00000579743 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
GGA3-208ENST00000579743 SLC6A13Q9NSD5 602 aa12□□□□□ -0.49
GGA3-208ENST00000579743 CDC42EP3Q9UKI2 254 aa12□□□□□ -0.49
GGA3-208ENST00000579743 RCE1Q9Y256 329 aa12□□□□□ -0.49
GGA3-208ENST00000579743 PCDHB14Q9Y5E9 798 aa12□□□□□ -0.49
GGA3-208ENST00000579743 USH1CQ9Y6N9 552 aa12□□□□□ -0.49
GGA3-208ENST00000579743 IGHV4-30-2A0A087WSY4 118 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 EVPLLA8MZ36 301 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 ATP6V1G2-DDX39BF2Z307 99 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 AIM2O14862 343 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
GGA3-208ENST00000579743 PRKAR1BP31321 381 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 RPS5P46782 204 aaKnown RBP11.99□□□□□ -0.49
GGA3-208ENST00000579743 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 MAPK11Q15759 364 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 TBRG1Q3YBR2 411 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 FAM69AQ5T7M9 428 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 CYB5R2Q6BCY4 276 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 SNX32Q86XE0 403 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 CCDC36Q8IYA8 594 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 OR4F15Q8NGB8 312 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 OR1K1Q8NGR3 316 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 SPATA3Q8NHX4 192 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 RNF217Q8TC41 542 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 MAGEE2Q8TD90 523 aaPredicted RBP11.99□□□□□ -0.49
GGA3-208ENST00000579743 LRRC8CQ8TDW0 803 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 GTF2H4Q92759 462 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 FBXO17Q96EF6 278 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 C7orf26Q96N11 449 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 OXGR1Q96P68 337 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 OR52B2Q96RD2 323 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 EPYCQ99645 322 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 TMBIM4Q9HC24 238 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 LPAR3Q9UBY5 353 aa11.99□□□□□ -0.49
GGA3-208ENST00000579743 CHD3Q12873 2000 aaKnown RBP11.99□□□□□ -0.49
GGA3-208ENST00000579743 ARPC4-TTLL3A0A0A6YYG9 625 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 TMEM229AB2RXF0 380 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 NDUFS8O00217 210 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 SERPINB7O75635 380 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 LGI1O95970 557 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 BMP2P12643 396 aa11.98□□□□□ -0.49
GGA3-208ENST00000579743 PRG2P13727 222 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms