RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 WDR31Q8NA23 367 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 RNF217Q8TC41 542 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 C3orf49Q96BT1 292 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SPATA5L1Q9BVQ7 753 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 BCL2L10Q9HD36 194 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SELENONQ9NZV5 590 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SLC13A4Q9UKG4 626 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PMF1-BGLAPU3KQ54 211 aa15.37■□□□□ 0.05
SLC9A3R1-203ENST00000578958 FN1P02751 2386 aaKnown RBP15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CSPG4Q6UVK1 2322 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 ETS2P15036 469 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 RPS5P46782 204 aaKnown RBP15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 DSCR9P59020 149 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 NCALDP61601 193 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 IRX1P78414 480 aaPredicted RBP15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 HOXC5Q00444 222 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 HMBOX1Q6NT76 420 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CREB3L2Q70SY1 520 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 MFSD8Q8NHS3 518 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 NFKBIDQ8NI38 313 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SLC35B4Q969S0 331 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SPDL1Q96EA4 605 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 TLN2Q9Y4G6 2542 aa15.36■□□□□ 0.05
SLC9A3R1-203ENST00000578958 EVPLLA8MZ36 301 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 ZNF43P17038 809 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PAX7P23759 505 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 APOBEC3AP31941 199 aaPredicted RBP15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SELENOPP49908 381 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 IDH3AP50213 366 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 C1DQ13901 141 aaKnown RBP15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 HIKESHIQ53FT3 197 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 REEP3Q6NUK4 255 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 ALKBH3Q96Q83 286 aaPredicted RBP15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CCDC28BQ9BUN5 200 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 OBP2BQ9NPH6 170 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 YAE1D1Q9NRH1 226 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CORO2BQ9UQ03 480 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 ZANQ9Y493 2812 aa15.35■□□□□ 0.05
SLC9A3R1-203ENST00000578958 TMEM229AB2RXF0 380 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 OR2T1O43869 369 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 LGI1O95970 557 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PNMTP11086 282 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 BMP2P12643 396 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SLC6A2P23975 617 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PRKAR1BP31321 381 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 MRPL19P49406 292 aaKnown RBP15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 AQP5P55064 265 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CDK6Q00534 326 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 AGKQ53H12 422 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 C11orf71Q6IPW1 123 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 BLOC1S3Q6QNY0 202 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 B3GLCTQ6Y288 498 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PRIMA1Q86XR5 153 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 KDM8Q8N371 416 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 OR1K1Q8NGR3 316 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 HTRA1Q92743 480 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 ZNF607Q96SK3 696 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 EBF4Q9BQW3 602 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 SLCO1B3Q9NPD5 702 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 MOKQ9UQ07 419 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 CHST2Q9Y4C5 530 aa15.34■□□□□ 0.05
SLC9A3R1-203ENST00000578958 PRORSD1PA6NEY8 169 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 ATP6V1G2-DDX39BF2Z307 99 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 AIM2O14862 343 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 TLX2O43763 284 aaPredicted RBP15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 NPIPB7O75200 414 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 CRLF1O75462 422 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 ARAFP10398 606 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 CLDN17P56750 224 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SLC25A3Q00325 362 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 TBRG1Q3YBR2 411 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 ALG10BQ5I7T1 473 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 LRIF1Q5T3J3 769 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 C5orf46Q6UWT4 87 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 EPHX4Q8IUS5 362 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 DNAJA4Q8WW22 397 aaPredicted RBP15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SLC38A4Q969I6 547 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 FBXO17Q96EF6 278 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 KTI12Q96EK9 354 aaPredicted RBP15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 ATP6V1G3Q96LB4 118 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 C12orf10Q9HB07 376 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 TMEM27Q9HBJ8 222 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SLAMF8Q9P0V8 285 aa15.33■□□□□ 0.04
SLC9A3R1-203ENST00000578958 JMJD1CQ15652 2540 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 IGHV4-30-2A0A087WSY4 118 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 AKAP8O43823 692 aaKnown RBP15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 CD5LO43866 347 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SLC43A1O75387 559 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SERPINB7O75635 380 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 CRYAAP02489 173 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 P2RY4P51582 365 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SH3BGRP55822 239 aaPredicted RBP15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 ROR2Q01974 943 aaKnown RBP15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 LGALS3BPQ08380 585 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SCARB2Q14108 478 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 SQLEQ14534 574 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 PAGE3Q5JUK9 113 aa15.32■□□□□ 0.04
SLC9A3R1-203ENST00000578958 FAM69AQ5T7M9 428 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms