RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 FAM205BPQ63HN1 556 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SLC6A19Q695T7 634 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ZNF544Q6NX49 715 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 MZT2AQ6P582 158 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 LEG1Q6P5S2 330 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 TMEM81Q6P7N7 255 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 DNM1P34Q6PK57 102 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 PAQR6Q6TCH4 344 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 PLEKHG7Q6ZR37 379 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 KLBQ86Z14 1044 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SCAIQ8N9R8 606 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 NPEPL1Q8NDH3 523 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SDR9C7Q8NEX9 313 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 SNX33Q8WV41 574 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 THAP4Q8WY91 577 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 PHYHIPQ92561 330 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ATOH1Q92858 354 aaPredicted RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 SPACA9Q96E40 222 aaPredicted RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 LIN37Q96GY3 246 aaPredicted RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 MRGPRX4Q96LA9 322 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 MED20Q9H944 212 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 CPNE5Q9HCH3 593 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 TMEM9BQ9NQ34 198 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 TXNL4BQ9NX01 149 aaKnown RBP10.11□□□□□ -0.79
SKA2-204ENST00000578519 TOR4AQ9NXH8 423 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 ADAM30Q9UKF2 790 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 PCDHGA1Q9Y5H4 931 aa10.11□□□□□ -0.79
SKA2-204ENST00000578519 IGHV1-45A0A0A0MS14 117 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 ARPC4-TTLL3A0A0A6YYG9 625 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 ISPDA4D126 451 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 HSPB2A8KAH6 182 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 AGRPO00253 132 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SEC14L5O43304 696 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 RNF13O43567 381 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 RGS9O75916 674 aaPredicted RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 CDRT1O95170 752 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 APOL3O95236 402 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SPI1P17947 270 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 ADH6P28332 368 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 RPS5P46782 204 aaKnown RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 RPL18Q07020 188 aaKnown RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 ZP4Q12836 540 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 FHL1Q13642 323 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 PCOLCEQ15113 449 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 HSPB2Q16082 182 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 CCDC58Q4VC31 144 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SLC25A53Q5H9E4 307 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 CD200R1LQ6Q8B3 271 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SHFQ7M4L6 423 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 HDDC2Q7Z4H3 204 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 FAM220AQ7Z4H9 259 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 ADGRG3Q86Y34 549 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 NAXDQ8IW45 347 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SLC35F2Q8IXU6 374 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SIRT6Q8N6T7 355 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 LRRC17Q8N6Y2 441 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 CYB561A3Q8NBI2 242 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 OR4K17Q8NGC6 315 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 MFSD8Q8NHS3 518 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 THAP3Q8WTV1 239 aaPredicted RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 SLC25A43Q8WUT9 341 aaPredicted RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 RNF138Q8WVD3 245 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 ASB15Q8WXK1 588 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 TAAR8Q969N4 342 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 SLC25A36Q96CQ1 311 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 KTI12Q96EK9 354 aaPredicted RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 ADGRL4Q9HBW9 690 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 AKIP1Q9NQ31 210 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 KLHL1Q9NR64 748 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 GALNT8Q9NY28 637 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 MRPL39Q9NYK5 338 aaKnown RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 UNC13CQ8NB66 2214 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 PCDH15Q96QU1 1955 aa10.1□□□□□ -0.79
SKA2-204ENST00000578519 COL5A1P20908 1838 aaPredicted RBP10.1□□□□□ -0.79
SKA2-204ENST00000578519 KNL1Q8NG31 2342 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 TEX13CA0A0J9YWL9 993 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 IQCMA0A1B0GVH7 501 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 A0A1W2PQ72 361 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 TMEM72A0PK05 275 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 J3QLW9 94 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 CASKO14936 926 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 FOXD2O60548 495 aaPredicted RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 OR2J2O76002 312 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 DXOO77932 396 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 STK17BO94768 372 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ADRA2AP08913 450 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF19P17023 458 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 PRKCAP17252 672 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 MYL9P24844 172 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 CRABP1P29762 137 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 DAP3P51398 398 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 SSR4P51571 173 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 DEFA1P59665 94 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 DEFA3P59666 94 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 RPL27P61353 136 aaKnown RBP10.09□□□□□ -0.79
SKA2-204ENST00000578519 EGR4Q05215 589 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF181Q2M3W8 571 aa10.09□□□□□ -0.79
SKA2-204ENST00000578519 ZNF791Q3KP31 576 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms