RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 UBL7Q96S82 380 aaPredicted RBP16.02■□□□□ 0.16
ERBB2-205ENST00000578199 FOXQ1Q9C009 403 aa16.02■□□□□ 0.16
ERBB2-205ENST00000578199 NCDNQ9UBB6 729 aa16.02■□□□□ 0.16
ERBB2-205ENST00000578199 MRPS7Q9Y2R9 242 aaKnown RBP16.02■□□□□ 0.16
ERBB2-205ENST00000578199 RNF215Q9Y6U7 377 aa16.02■□□□□ 0.16
ERBB2-205ENST00000578199 OGG1O15527 345 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 MBTPS2O43462 519 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 PPM1BO75688 479 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 CD53P19397 219 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 PITPNBP48739 271 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 RPL6Q02878 288 aaKnown RBP16.02■□□□□ 0.15
ERBB2-205ENST00000578199 ZP2Q05996 745 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 COL19A1Q14993 1142 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 CDONQ4KMG0 1287 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.15
ERBB2-205ENST00000578199 FNDC7Q5VTL7 733 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 MTFR2Q6P444 385 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 ATG4DQ86TL0 474 aaPredicted RBP16.02■□□□□ 0.15
ERBB2-205ENST00000578199 TPRA1Q86W33 373 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 TDHQ8IZJ6 230 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 MS4A15Q8N5U1 240 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 ADAMTS18Q8TE60 1221 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 KTI12Q96EK9 354 aaPredicted RBP16.02■□□□□ 0.15
ERBB2-205ENST00000578199 SRA1Q9HD15 236 aaKnown RBP16.02■□□□□ 0.15
ERBB2-205ENST00000578199 NANSQ9NR45 359 aa16.02■□□□□ 0.15
ERBB2-205ENST00000578199 BLACEA4D250 179 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 RHPN2P1A8MT19 583 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 H0YIG0 161 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 SCDO00767 359 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 NPR2P20594 1047 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 PTBP1P26599 531 aaKnown RBP eCLIP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 GRK6P43250 576 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 RPS4XP62701 263 aaKnown RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 SERTAD2Q14140 314 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 GGTLC2Q14390 218 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 GPR176Q14439 515 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 GRM7Q14831 915 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 ZNF74Q16587 644 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 CEP78Q5JTW2 689 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 TCTE1Q5JU00 501 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 OTPQ5XKR4 325 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 WBP2NLQ6ICG8 309 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 POMGNT2Q8NAT1 580 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 ZNF578Q96N58 590 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 ELF4Q99607 663 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 SLC2A4RGQ9NR83 387 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 PCNX3Q9H6A9 2034 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 TNRC18O15417 2968 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 DCTN6O00399 190 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 TOMM34Q15785 309 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 KRT74Q7RTS7 529 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 ZNF563Q8TA94 476 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 HSD17B8Q92506 261 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 NMNAT2Q9BZQ4 307 aa16.01■□□□□ 0.15
ERBB2-205ENST00000578199 PAQR5Q9NXK6 330 aaPredicted RBP16.01■□□□□ 0.15
ERBB2-205ENST00000578199 KHNYNO15037 678 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 ZNF264O43296 627 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ICOSLGO75144 302 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 RPS27P42677 84 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 NANOS3P60323 173 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 CTXN1P60606 82 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ACTA2P62736 377 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ACTG2P63267 376 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 CFHR1Q03591 330 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 TDGQ13569 410 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 LINC01590Q5TEZ4 76 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 C1orf189Q5VU69 101 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 FAM71CQ8NEG0 241 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 RFT1Q96AA3 541 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ZFP3Q96NJ6 502 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ALG12Q9BV10 488 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 OR2B2Q9GZK3 357 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 TTYH1Q9H313 450 aaPredicted RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 BRD7Q9NPI1 651 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 FITM1A5D6W6 292 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ACOD1A6NK06 481 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ARPC3O15145 178 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 CPNE3O75131 537 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 RPP14O95059 124 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 IL33O95760 270 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 EPXP11678 715 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 NUDT1P36639 197 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 PPICP45877 212 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 LGALS3BPQ08380 585 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 C17orf82Q86X59 251 aaPredicted RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 SYS1Q8N2H4 156 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 TRIM63Q969Q1 353 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 KCTD12Q96CX2 325 aaKnown RBP16■□□□□ 0.15
ERBB2-205ENST00000578199 SLC25A18Q9H1K4 315 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 ABCG5Q9H222 651 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 MMP25Q9NPA2 562 aa16■□□□□ 0.15
ERBB2-205ENST00000578199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 H3BMH7 237 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 NDUFB5O43674 189 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 GPANK1O95872 356 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 CD3GP09693 182 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 S100A1P23297 94 aa15.99■□□□□ 0.15
ERBB2-205ENST00000578199 TACR3P29371 465 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms