RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 C17orf105B2RV13 164 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TRA2BP62995 288 aaKnown RBP16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF169Q14929 603 aaPredicted RBP16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 SLC9A3R2Q15599 337 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 FRMD1Q8N878 549 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 STEAP2Q8NFT2 490 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 OR51S1Q8NGJ8 323 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 RLN3Q8WXF3 142 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 UPRTQ96BW1 309 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 FBXL4Q9UKA2 621 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 CAMK2AQ9UQM7 478 aa16.54■□□□□ 0.24
ATPAF1-214ENST00000576409 TCRBV21S2A2A0A5A6 115 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 H0Y8X5 98 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 WISP3O95389 354 aaPredicted RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 APBB3O95704 486 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 CLDN20P56880 219 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SLC22A6Q4U2R8 563 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SFXN5Q8TD22 340 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SDF2Q99470 211 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 NRSN2Q9GZP1 204 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 PRSS16Q9NQE7 514 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 MED17Q9NVC6 651 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 VSX1Q9NZR4 365 aaPredicted RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 ICE1Q9Y2F5 2266 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR2T7P0C7T2 308 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 MVDP53602 400 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 PRPS1P60891 318 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 DMRTC1Q5HYR2 192 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF765Q7L2R6 523 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 ZBTB44Q8NCP5 570 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR4K17Q8NGC6 315 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR2T27Q8NH04 317 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 ATF6BQ99941 703 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 APOBEC3BQ9UH17 382 aaKnown RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SYT5O00445 386 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 NPC1O15118 1278 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SOD1P00441 154 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 S100A11P31949 105 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 VAMP2P63027 116 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 GPR18Q14330 331 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 ZNF362Q5T0B9 420 aaPredicted RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR6V1Q8N148 313 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR52B4Q8NGK2 314 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 TRMT61AQ96FX7 289 aaKnown RBP16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 NUDT22Q9BRQ3 303 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SERINC1Q9NRX5 453 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 SAGE1Q9NXZ1 904 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 OR51B4Q9Y5P0 310 aa16.53■□□□□ 0.24
ATPAF1-214ENST00000576409 FFAR1O14842 300 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 DCTDP32321 178 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 OR1D4P47884 311 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 CCR9P51686 369 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 LIPNQ5VXI9 398 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 CD276Q5ZPR3 534 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 RHOUQ7L0Q8 258 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 TMEM151BQ8IW70 566 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 FBXL6Q8N531 539 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 BTBD2Q9BX70 525 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 EMC7Q9NPA0 242 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 LSM5Q9Y4Y9 91 aaKnown RBP16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 SYT7O43581 403 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 HIST1H1CP16403 213 aaKnown RBP16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 PRKAR1BP31321 381 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 LUMP51884 338 aaPredicted RBP16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 FGL1Q08830 312 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 FAM74A1Q5RGS3 127 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 LSRQ86X29 649 aaPredicted RBP16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 OR4Q3Q8NH05 313 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 FAM83CQ9BQN1 747 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 RGCCQ9H4X1 137 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 CGGBP1Q9UFW8 167 aaPredicted RBP16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
ATPAF1-214ENST00000576409 A0A0B4J2A0 478 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 TMEM82A0PJX8 343 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 CSF1P09603 554 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 HOXB3P14651 431 aaPredicted RBP16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 S100A2P29034 98 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 MAMDC2Q7Z304 686 aaPredicted RBP16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 SLC35F3Q8IY50 421 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 PHB2Q99623 299 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 PTDSS2Q9BVG9 487 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 SDHAF2Q9NX18 166 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 SHPKQ9UHJ6 478 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 RHBDD3Q9Y3P4 386 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 ASXL3Q9C0F0 2248 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 PKLRP30613 574 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 SFTPDP35247 375 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 FXYD4P59646 89 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 USF2Q15853 346 aaPredicted RBP16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 FAM78AQ5JUQ0 283 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 METRNLQ641Q3 311 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 Q6ZSR6 202 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 CMTM4Q8IZR5 234 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 FGF22Q9HCT0 170 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 NCDNQ9UBB6 729 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 ADAM29Q9UKF5 820 aa16.52■□□□□ 0.23
ATPAF1-214ENST00000576409 APC2O95996 2303 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms