RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 EEF1E1-BLOC1S5C9J1V9 151 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 NEDD8-MDP1E9PL57 170 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SYT5O00445 386 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 IFNGP01579 166 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 ZNF3P17036 446 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 RPL4P36578 427 aaKnown RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SKP1P63208 163 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 HENMT1Q5T8I9 393 aaKnown RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 DPPA4Q7L190 304 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 IRF7Q92985 503 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 DVL3Q92997 716 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 PNPLA2Q96AD5 504 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 MS4A4EQ96PG1 132 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 RIOK2Q9BVS4 552 aaKnown RBP8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SPHK2Q9NRA0 654 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 SEMA4GQ9NTN9 838 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 PCDHGA5Q9Y5G8 931 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 WNT6Q9Y6F9 365 aa8.84□□□□□ -0.99
CCDC40-212ENST00000574799 GFYI3L273 518 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 CCSO14618 274 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 ACAA1P09110 424 aaPredicted RBP8.84□□□□□ -1
CCDC40-212ENST00000574799 ATXN8OSP0DMR3 200 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 GRPRP30550 384 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 OPRD1P41143 372 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 NRG3P56975 720 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 IKZF1Q13422 519 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 LY6G5CQ5SRR4 150 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 DCAF12L2Q5VW00 463 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 NDUFAF7Q7L592 441 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 MUC20Q8N307 709 aaPredicted RBP8.84□□□□□ -1
CCDC40-212ENST00000574799 STEAP2Q8NFT2 490 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 SETD7Q8WTS6 366 aaKnown RBP8.84□□□□□ -1
CCDC40-212ENST00000574799 CYB5D2Q8WUJ1 264 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 NXPE3Q969Y0 559 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 SARGQ9BW04 601 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 NOX4Q9NPH5 578 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 ASH2LQ9UBL3 628 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 NPTNQ9Y639 398 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 SLC22A7Q9Y694 548 aa8.84□□□□□ -1
CCDC40-212ENST00000574799 TRAPPC13A5PLN9 417 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 UNC119BA6NIH7 251 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 NPC1O15118 1278 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 GALR3O60755 368 aaPredicted RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 LAMP2P13473 410 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 CPN1P15169 458 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 PTAFRP25105 342 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 S100A2P29034 98 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 PDHA2P29803 388 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 RBM34P42696 430 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 SHC2P98077 582 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 RPE65Q16518 533 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 SLC25A30Q5SVS4 291 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 TMEM200AQ86VY9 491 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 TMEM255BQ8WV15 326 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 ZNF480Q8WV37 535 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 SLC41A3Q96GZ6 507 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 TMPRSS13Q9BYE2 586 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 MRPS18AQ9NVS2 196 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 GHRLQ9UBU3 117 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 LSM7Q9UK45 103 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 TICRRQ7Z2Z1 1910 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 TRAV18A0A075B6X5 111 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 A0A1B0GVT2 93 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 GRXCR1A8MXD5 290 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 PRRT4C9JH25 899 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 OR1F1O43749 312 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 LRG1P02750 347 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 MAS1P04201 325 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 HMGN2P05204 90 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 FPR3P25089 353 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 NFYBP25208 207 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 ITPKBP27987 946 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 CD34P28906 385 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 SPINT3P49223 89 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 SMAD2Q15796 467 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 GLT8D1Q68CQ7 371 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 OR7E24Q6IFN5 339 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 ETFBKMTQ8IXQ9 262 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 OR6K3Q8NGY3 331 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 PHOSPHO1Q8TCT1 267 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 GAS2L1Q99501 681 aaPredicted RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 IKZF2Q9UKS7 526 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 SLC7A7Q9UM01 511 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 INSL6Q9Y581 213 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 A0A0C4DFX4 3053 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 TP53BP1Q12888 1972 aaPredicted RBP8.83□□□□□ -1
CCDC40-212ENST00000574799 ANKRD61A6NGH8 418 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 RCBTB2O95199 551 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 FUT1P19526 365 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 FCARP24071 287 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 THBS2P35442 1172 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 H2BFSP57053 126 aa8.83□□□□□ -1
CCDC40-212ENST00000574799 POLR2LP62875 67 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms