RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 VAPAQ9P0L0 249 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 B3GAT1Q9P2W7 334 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 PRDM4Q9UKN5 801 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 ZNF232Q9UNY5 417 aa15.82■□□□□ 0.12
CHD3-214ENST00000572579 COL6A5A8TX70 2615 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 IGKV1D-42A0A075B6H8 117 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 A0A096LPI6 279 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 ATP6V1G2-DDX39BF2Z307 99 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 NR5A2O00482 541 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 TPST2O60704 377 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 FZD7O75084 574 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 LY6HO94772 140 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 FABP6P51161 128 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 COPZ1P61923 177 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 PPP2R2BQ00005 443 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 ADRM1Q16186 407 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 TMEM225Q6GV28 225 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 STK35Q8TDR2 534 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 NANOS1Q8WY41 292 aaKnown RBP15.81■□□□□ 0.12
CHD3-214ENST00000572579 BCL2L2Q92843 193 aaPredicted RBP15.81■□□□□ 0.12
CHD3-214ENST00000572579 HS6ST2Q96MM7 605 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 PIF1Q9H611 641 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 TCF7L2Q9NQB0 619 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 FAIMQ9NVQ4 179 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 POU2F3Q9UKI9 436 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 AMDHD2Q9Y303 409 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 IFT52Q9Y366 437 aa15.81■□□□□ 0.12
CHD3-214ENST00000572579 CR1P17927 2039 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 IGHV1-18A0A0C4DH31 117 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 ZNF432O94892 652 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 PNMTP11086 282 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 NCF2P19878 526 aaPredicted RBP15.8■□□□□ 0.12
CHD3-214ENST00000572579 DMTNQ08495 405 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 AGBL2Q5U5Z8 902 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 PRAMEF8Q5VWM4 474 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 PRAMEF7Q5VXH5 474 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 C6orf89Q6UWU4 347 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 WDFY1Q8IWB7 410 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 POMGNT2Q8NAT1 580 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 OR1K1Q8NGR3 316 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 MFSD8Q8NHS3 518 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 NFKBIDQ8NI38 313 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 TAAR8Q969N4 342 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 ZNF837Q96EG3 531 aaPredicted RBP15.8■□□□□ 0.12
CHD3-214ENST00000572579 SEC61A2Q9H9S3 476 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 THUMPD1Q9NXG2 353 aaKnown RBP15.8■□□□□ 0.12
CHD3-214ENST00000572579 MOKQ9UQ07 419 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 GMEB1Q9Y692 573 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 ATP23Q9Y6H3 246 aa15.8■□□□□ 0.12
CHD3-214ENST00000572579 A0A1B0GWA3 101 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 CD5LO43866 347 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ARAFP10398 606 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 RPS5P46782 204 aaKnown RBP15.79■□□□□ 0.12
CHD3-214ENST00000572579 PRPS1P60891 318 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TUBA1BP68363 451 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TUBA4AP68366 448 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TGFBR3Q03167 851 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 FADDQ13158 208 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ZSWIM7Q19AV6 140 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 SWI5Q1ZZU3 235 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TBRG1Q3YBR2 411 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TTMPQ5BVD1 217 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ZNF544Q6NX49 715 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 NIPAL3Q6P499 406 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 DLEU7Q6UYE1 221 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 NHLRC1Q6VVB1 395 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 TUBA1AQ71U36 451 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 FBXL14Q8N1E6 418 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ZNF525Q8N782 197 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 BBS10Q8TAM1 723 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 SLC25A36Q96CQ1 311 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ALKBH3Q96Q83 286 aaPredicted RBP15.79■□□□□ 0.12
CHD3-214ENST00000572579 TAPBPLQ9BX59 468 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 BARX1Q9HBU1 254 aaPredicted RBP15.79■□□□□ 0.12
CHD3-214ENST00000572579 CCDC167Q9P0B6 97 aa15.79■□□□□ 0.12
CHD3-214ENST00000572579 ZNF503-AS2A6NEH8 195 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 H7C417 338 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 TGDSO95455 350 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 ETS2P15036 469 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 PRKAR1BP31321 381 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 NRF1Q16656 503 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 MYPOPQ86VE0 399 aaPredicted RBP15.78■□□□□ 0.12
CHD3-214ENST00000572579 LSMEM1Q8N8F7 131 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 SLC35B4Q969S0 331 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 SPDL1Q96EA4 605 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 ADAD1Q96M93 576 aaKnown RBP15.78■□□□□ 0.12
CHD3-214ENST00000572579 TMEM45AQ9NWC5 275 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 RASD1Q9Y272 281 aa15.78■□□□□ 0.12
CHD3-214ENST00000572579 A0A096LPE4 126 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 A0A1W2PPZ6 126 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 ELOA3DA6NLF2 546 aaPredicted RBP15.77■□□□□ 0.12
CHD3-214ENST00000572579 VAMP5O95183 116 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 GPX2P18283 190 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 APOBEC3AP31941 199 aaPredicted RBP15.77■□□□□ 0.12
CHD3-214ENST00000572579 NUDT6P53370 316 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 AQP5P55064 265 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 CDK6Q00534 326 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 RAB35Q15286 201 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 ELOA3BQ3SY89 546 aa15.77■□□□□ 0.12
CHD3-214ENST00000572579 PHYHD1Q5SRE7 291 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms