RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TRIM2Q9C040 744 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 GPN1Q9HCN4 374 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 Q9N2J8 555 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 COPS3Q9UNS2 423 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 C19orf53Q9UNZ5 99 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 SESN1Q9Y6P5 492 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 V9GY05 133 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 LGALS8O00214 317 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 PLPP2O43688 288 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 ERGP11308 486 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 EEF1A1P68104 462 aaKnown RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 MMABQ96EY8 250 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 ZC3HAV1LQ96H79 300 aaKnown RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 WDR92Q96MX6 357 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 SFXN2Q96NB2 322 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 ZNF436Q9C0F3 470 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 KCNK15Q9H427 330 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 NRIP3Q9NQ35 241 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 AKAP7Q9P0M2 348 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 FBXL3Q9UKT7 428 aa14.08□□□□□ -0.16
USP43-202ENST00000570475 ATXN7L1Q9ULK2 861 aaPredicted RBP14.08□□□□□ -0.16
USP43-202ENST00000570475 CXorf51AA0A1B0GTR3 108 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 CTSBP07858 339 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 CDK5R1Q15078 307 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 GSG1Q2KHT4 349 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 BEX5Q5H9J7 111 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 GARNL3Q5VVW2 1013 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 FAM109BQ6ICB4 259 aaPredicted RBP14.07□□□□□ -0.16
USP43-202ENST00000570475 OR5M10Q6IEU7 315 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 HEPHL1Q6MZM0 1159 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 NHLRC1Q6VVB1 395 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 DGAT2L6Q6ZPD8 337 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 DPY19L4Q7Z388 723 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 PAQR7Q86WK9 346 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ZNF485Q8NCK3 441 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 B3GNT2Q9NY97 397 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 MED12Q93074 2177 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 CREBL2O60519 120 aaPredicted RBP14.07□□□□□ -0.16
USP43-202ENST00000570475 CCKBRP32239 447 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ACTA2P62736 377 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ACTG2P63267 376 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 BTG2P78543 158 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 OPCMLQ14982 345 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 TRAM1Q15629 374 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 SMAD2Q15796 467 aaKnown RBP14.07□□□□□ -0.16
USP43-202ENST00000570475 ITPRIPL2Q3MIP1 535 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 RPL13AP3Q6NVV1 102 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 NLRC3Q7RTR2 1065 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 FAM174AQ8TBP5 190 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 EXO5Q9H790 373 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 HRASLSQ9HDD0 168 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 A0A1W2PPL8 197 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ATP1B1P05026 303 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 MAOAP21397 527 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ART1P52961 327 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 PRMT2P55345 433 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 HTR4Q13639 388 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 CD276Q5ZPR3 534 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 PARM1Q6UWI2 310 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 OR2L13Q8N349 312 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 AVL9Q8NBF6 648 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 OR4C3Q8NH37 302 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 DGAT2Q96PD7 388 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 ALG12Q9BV10 488 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 GHITMQ9H3K2 345 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 KIR3DX1Q9H7L2 352 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 EMC7Q9NPA0 242 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 SLC6A5Q9Y345 797 aa14.07□□□□□ -0.16
USP43-202ENST00000570475 PDCD5O14737 125 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 RBBP9O75884 186 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 CCR9P51686 369 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ADPRHP54922 357 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 FAM53BQ14153 422 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 SLC36A2Q495M3 483 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 SFRP5Q5T4F7 317 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 PRAMEF8Q5VWM4 474 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 PRAMEF7Q5VXH5 474 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 NDUFAF7Q7L592 441 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 RNF113BQ8IZP6 322 aaKnown RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 OR5AK2Q8NH90 309 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ZNRF4Q8WWF5 429 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 B3GNT4Q9C0J1 378 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ZNF350Q9GZX5 532 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 TCEAL2Q9H3H9 227 aaPredicted RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 DIABLOQ9NR28 239 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 ABRACLQ9P1F3 81 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 GRHPRQ9UBQ7 328 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 SCP2D1Q9UJQ7 156 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 CAMK2AQ9UQM7 478 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 SLC22A7Q9Y694 548 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 EIF1AYO14602 144 aaKnown RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 GOSR2O14653 212 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 TMIGD3P0DMS9 266 aaPredicted RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 CDK2P24941 298 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 EIF1AXP47813 144 aaKnown RBP14.06□□□□□ -0.16
USP43-202ENST00000570475 BTN2A1Q7KYR7 527 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 OR51D1Q8NGF3 324 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 SMIM19Q96E16 107 aa14.06□□□□□ -0.16
USP43-202ENST00000570475 NRSN2Q9GZP1 204 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms