RNA–Protein interactions for RNA: ENST00000567535.5

SCAMP5-213, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-213ENST00000567535 TBRG1Q3YBR2 411 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 C1orf140Q5VVS0 124 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 CYB5R2Q6BCY4 276 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 CREB3L2Q70SY1 520 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 ANKRD42Q8N9B4 389 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 C3orf49Q96BT1 292 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 SLC38A2Q96QD8 506 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 TPT1P8Q9HAU6 139 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 FKBP7Q9Y680 259 aa17.22■□□□□ 0.35
SCAMP5-213ENST00000567535 OR6C65A6NJZ3 312 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 VWC2LB2RUY7 222 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 PHF1O43189 567 aaPredicted RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 ANP32DO95626 131 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 LGI1O95970 557 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 NCF2P19878 526 aaPredicted RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 PAX7P23759 505 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 WDR4P57081 412 aaKnown RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 SNRPD2P62316 118 aaKnown RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 LGALS3BPQ08380 585 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 RPS26P11Q5JNZ5 115 aaPredicted RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 PRAMEF8Q5VWM4 474 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 PRAMEF7Q5VXH5 474 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 MSANTD1Q6ZTZ1 278 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 CLIP4Q8N3C7 705 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 TMEM19Q96HH6 336 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 MAELQ96JY0 434 aaKnown RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 SORCS2Q96PQ0 1159 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 ZNF317Q96PQ6 595 aaPredicted RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 KATNB1Q9BVA0 655 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 SPATA9Q9BWV2 254 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 BEX2Q9BXY8 128 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 THUMPD1Q9NXG2 353 aaKnown RBP17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 LPAR3Q9UBY5 353 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 RASD1Q9Y272 281 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 CHST2Q9Y4C5 530 aa17.21■□□□□ 0.35
SCAMP5-213ENST00000567535 ARPC4-TTLL3A0A0A6YYG9 625 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 SLCO1B7G3V0H7 640 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 NDUFS8O00217 210 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 CRYAAP02489 173 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 KITP10721 976 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 LSM11P83369 360 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 GTDC1Q4AE62 458 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 NXNQ6DKJ4 435 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 LINGO2Q7L985 606 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 CROCCP2Q86T23 111 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 SERPINA11Q86U17 422 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 EPHX4Q8IUS5 362 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 STK35Q8TDR2 534 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 BCL2L2Q92843 193 aaPredicted RBP17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 VPS33AQ96AX1 596 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 ZBTB9Q96C00 473 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 KCNS3Q9BQ31 491 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 ARMC7Q9H6L4 198 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 RMND5AQ9H871 391 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 SDR39U1Q9NRG7 319 aaPredicted RBP17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 CA10Q9NS85 328 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 ZIM2Q9NZV7 527 aa17.2■□□□□ 0.34
SCAMP5-213ENST00000567535 A0A0G2JPF8 293 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 TMEM120BA0PK00 339 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 HNRNPCL2B2RXH8 293 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 HNRNPCL3B7ZW38 293 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 FTCDNL1E5RQL4 147 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 HNRNPCL1O60812 293 aaKnown RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 PDE5AO76074 875 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 AHSA1O95433 338 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 HNRNPCL4P0DMR1 293 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 SERPINF1P36955 418 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 PDLIM4P50479 330 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 UBE2NP61088 152 aaKnown RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 C3orf36Q3SXR2 165 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 NIPAL3Q6P499 406 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 MFSD8Q8NHS3 518 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 MAGEE2Q8TD90 523 aaPredicted RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 ITCHQ96J02 903 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 PIMREGQ9BSJ6 248 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 LINC00470Q9BZP3 86 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 SHARPINQ9H0F6 387 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 CACYBPQ9HB71 228 aaKnown RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 MOV10Q9HCE1 1003 aaKnown RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 CRNNQ9UBG3 495 aaPredicted RBP17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 ZNF232Q9UNY5 417 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 IFT52Q9Y366 437 aa17.19■□□□□ 0.34
SCAMP5-213ENST00000567535 TMEM247A6NEH6 219 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 UPK3AO75631 287 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 PNMTP11086 282 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 NR4A2P43354 598 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 GZMKP49863 264 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 SH3BGRP55822 239 aaPredicted RBP17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 NAAAQ02083 359 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 GGTLC2Q14390 218 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 SLC9B1Q4ZJI4 515 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 ANKRD16Q6P6B7 361 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 SLC46A3Q7Z3Q1 461 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 SLC35B4Q969S0 331 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 PTDSS2Q9BVG9 487 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 NELFAQ9H3P2 528 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 MYOZ1Q9NP98 299 aaPredicted RBP17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 RCE1Q9Y256 329 aa17.18■□□□□ 0.34
SCAMP5-213ENST00000567535 B9A039 149 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms