RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LEF1Q9UJU2 399 aaPredicted RBP12.86□□□□□ -0.35
FANCA-220ENST00000566409 EVPLLA8MZ36 301 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 TMCC2O75069 709 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 PNMTP11086 282 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 SLC6A2P23975 617 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 CDKN1AP38936 164 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 RPS5P46782 204 aaKnown RBP12.85□□□□□ -0.35
FANCA-220ENST00000566409 SELENOPP49908 381 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 ZNF83P51522 516 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 ATP5J2P56134 94 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 PCBP3P57721 371 aaKnown RBP12.85□□□□□ -0.35
FANCA-220ENST00000566409 RPS4XP62701 263 aaKnown RBP12.85□□□□□ -0.35
FANCA-220ENST00000566409 TMEM225Q6GV28 225 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 LINGO2Q7L985 606 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 DHDDSQ86SQ9 333 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 TAAR8Q969N4 342 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 SLC25A36Q96CQ1 311 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 CGREF1Q99674 301 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 TAPBPLQ9BX59 468 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 NDUFAF1Q9Y375 327 aa12.85□□□□□ -0.35
FANCA-220ENST00000566409 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 A0A0G2JND7 137 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ELOA3DA6NLF2 546 aaPredicted RBP12.84□□□□□ -0.35
FANCA-220ENST00000566409 E7EQL1 145 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 MFN2O95140 757 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 VAMP5O95183 116 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 AHSA1O95433 338 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 LY6G6DO95868 133 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 PTNP21246 168 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 CD40P25942 277 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 MPGP29372 298 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 MTPNP58546 118 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 LTBQ06643 244 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ELOA3BQ3SY89 546 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 CLEC9AQ6UXN8 241 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 B3GLCTQ6Y288 498 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 KRT73Q86Y46 540 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 HIPK4Q8NE63 616 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ELOA3Q8NG57 546 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 BDH2Q9BUT1 245 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 TRAF4Q9BUZ4 470 aaPredicted RBP12.84□□□□□ -0.35
FANCA-220ENST00000566409 SPATA5L1Q9BVQ7 753 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 SLC17A5Q9NRA2 495 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ZNF446Q9NWS9 450 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 B3GAT1Q9P2W7 334 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 CORO2BQ9UQ03 480 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 CR1P17927 2039 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ARFGEF3Q5TH69 2177 aa12.84□□□□□ -0.35
FANCA-220ENST00000566409 ANK3Q12955 4377 aaKnown RBP12.83□□□□□ -0.35
FANCA-220ENST00000566409 ABCA1O95477 2261 aa12.83□□□□□ -0.35
FANCA-220ENST00000566409 FBP2O00757 339 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
FANCA-220ENST00000566409 NDUFS7O75251 213 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 UPK3AO75631 287 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 ZNF432O94892 652 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 PTAFRP25105 342 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 GZMMP51124 257 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 CDH11P55287 796 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 OR1Q1Q15612 314 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 DUSP7Q16829 419 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 HIKESHIQ53FT3 197 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 CGB2Q6NT52 195 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 TMEM108Q6UXF1 575 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 DTX2Q86UW9 622 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 ARMC8Q8IUR7 673 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 POMGNT2Q8NAT1 580 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 SMYD1Q8NB12 490 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.36
FANCA-220ENST00000566409 TSPEARQ8WU66 669 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
FANCA-220ENST00000566409 SLC38A4Q969I6 547 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 BOD1Q96IK1 185 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 ZNF607Q96SK3 696 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 KAT8Q9H7Z6 458 aaKnown RBP12.83□□□□□ -0.36
FANCA-220ENST00000566409 RPS6KB2Q9UBS0 482 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 TRIM33Q9UPN9 1127 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 RASD1Q9Y272 281 aa12.83□□□□□ -0.36
FANCA-220ENST00000566409 A0A087WUJ7 227 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 A0A0B4J2E0 115 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 A0A1B0GX12 115 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 M0QX08 132 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 M0R082 166 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 M0R1B8 84 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 ANGPT2O15123 496 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 SERPINB7O75635 380 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 OPN1SWP03999 348 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 HEXAP06865 529 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 CDH2P19022 906 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 GRPRP30550 384 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 RGS8P57771 180 aaPredicted RBP12.82□□□□□ -0.36
FANCA-220ENST00000566409 NPTX1Q15818 432 aa12.82□□□□□ -0.36
FANCA-220ENST00000566409 METTL21CQ5VZV1 264 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms