RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ANKRD28O15084 1053 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 PLPP2O43688 288 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 SLC22A3O75751 556 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 IL6P05231 212 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 LSP1P33241 339 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 PCGF2P35227 344 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 THBS4P35443 961 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 NCBP2P52298 156 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 FOXG1P55316 489 aaPredicted RBP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 SLC25A3Q00325 362 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 SELENBP1Q13228 472 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF362Q5T0B9 420 aaPredicted RBP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 TMEM107Q6UX40 140 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 TMPPEQ6ZT21 453 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MSANTD1Q6ZTZ1 278 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MAVSQ7Z434 540 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 REC114Q7Z4M0 266 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 CARM1Q86X55 608 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MIER2Q8N344 545 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 OR2L13Q8N349 312 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 NUP37Q8NFH4 326 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 OR52E4Q8NGH9 312 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 CDC26Q8NHZ8 85 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 TSPEARQ8WU66 669 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 PIK3R3Q92569 461 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 ELP4Q96EB1 424 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 ZHX1-C8orf76Q96EF9 292 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 OR52B2Q96RD2 323 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 C1orf50Q9BV19 199 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 DUSP26Q9BV47 211 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MS4A5Q9H3V2 200 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF442Q9H7R0 627 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 BEX1Q9HBH7 125 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 MOV10Q9HCE1 1003 aaKnown RBP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 NPHS2Q9NP85 383 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 SDR39U1Q9NRG7 319 aaPredicted RBP7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 PCDHGB4Q9UN71 923 aa7.8□□□□□ -1.16
VPS9D1-205ENST00000565452 A0A0G2JND7 137 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PRSS51A0A1B0GVH4 220 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 H3BNH8 94 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 GTPBP1O00178 669 aaKnown RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 RNASET2O00584 256 aaKnown RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 WNT9BO14905 357 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PDPK1O15530 556 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 AKAP10O43572 662 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PSMG1O95456 288 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ALDOCP09972 364 aaKnown RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PRKCAP17252 672 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 MPGP29372 298 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 S100A3P33764 101 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 NTF4P34130 210 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 DIO1P49895 249 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 P2RX1P51575 399 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 SUMO3P55854 103 aaPredicted RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 NAAAQ02083 359 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 POU3F1Q03052 451 aaPredicted RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 SRSF4Q08170 494 aaKnown RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PTGR1Q14914 329 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 C3orf36Q3SXR2 165 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ELFN2Q5R3F8 820 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 FAM219BQ5XKK7 198 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ZCCHC12Q6PEW1 402 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 C16orf87Q6PH81 154 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 BRICD5Q6PL45 260 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 Q6ZPA2 131 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF527Q8NB42 609 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PSMA8Q8TAA3 256 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 PHOSPHO1Q8TCT1 267 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 GPR119Q8TDV5 335 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 OR5P2Q8WZ92 322 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 MOAP1Q96BY2 351 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 RAB39BQ96DA2 213 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 BOD1Q96IK1 185 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 AMDHD1Q96NU7 426 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 RBM4BQ9BQ04 359 aaKnown RBP7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 KLHDC3Q9BQ90 382 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 EBF4Q9BQW3 602 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF416Q9BWM5 594 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 TPK1Q9H3S4 243 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ZNF665Q9H7R5 613 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 REV1Q9UBZ9 1251 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 GIMAP2Q9UG22 337 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 KLHL21Q9UJP4 597 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 ICAM5Q9UMF0 924 aa7.79□□□□□ -1.16
VPS9D1-205ENST00000565452 E9PBE3 544 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 SLC22A2O15244 555 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 SYNGR3O43761 229 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CCDC22O60826 627 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 KCNK2O95069 426 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 NKX2-2O95096 273 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 LAMP1P11279 417 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 CDH2P19022 906 aaPredicted RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 OMGP23515 440 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 MAGEA8P43361 318 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 EVX1P49640 407 aa7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 UBE2NP61088 152 aaKnown RBP7.78□□□□□ -1.16
VPS9D1-205ENST00000565452 GNGT1P63211 74 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms