RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DNAJA3Q96EY1 480 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 AURKBQ96GD4 344 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 C7orf26Q96N11 449 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 OR52B2Q96RD2 323 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 SPATA5L1Q9BVQ7 753 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 CACNG6Q9BXT2 260 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 LINC00470Q9BZP3 86 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 PAIP1Q9H074 479 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 EVA1AQ9H8M9 152 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 ADPRHL2Q9NX46 363 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 GDF2Q9UK05 429 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 FBXO9Q9UK97 447 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 ATP23Q9Y6H3 246 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 USH1CQ9Y6N9 552 aa10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-204ENST00000564664 LOC102725191A0A1B0GVB3 256 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 A0A1W2PR80 420 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 TMEM229AB2RXF0 380 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 C5orf58C9J3I9 102 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 RPL36A-HNRNPH2H7BZ11 118 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 AHSA1O95433 338 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 IFNA2P01563 188 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 PNMTP11086 282 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 SLC25A16P16260 332 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 PRKAR1BP31321 381 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 EFNA4P52798 201 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 SH3BGRP55822 239 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 LOXL1Q08397 574 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 BNIP2Q12982 314 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 MFSD13AQ14CX5 517 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 BEND6Q5SZJ8 279 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 LRIF1Q5T3J3 769 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 C6orf89Q6UWU4 347 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 MAVSQ7Z434 540 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 KRT73Q86Y46 540 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 CCDC36Q8IYA8 594 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 BHLHE22Q8NFJ8 381 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 DNAJA4Q8WW22 397 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 PROX1Q92786 737 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 VPS33AQ96AX1 596 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 ZNF385AQ96PM9 386 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 CCDC28BQ9BUN5 200 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 C1QTNF6Q9BXI9 259 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 RPS6KB2Q9UBS0 482 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 CORO2BQ9UQ03 480 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
GTF3C1-204ENST00000564664 CHD3Q12873 2000 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 ATRQ13535 2644 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 ARPC4-TTLL3A0A0A6YYG9 625 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 KIAA1324LA8MWY0 1029 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 VSTM5A8MXK1 200 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 FRS3O43559 492 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 FZD7O75084 574 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 NDUFS7O75251 213 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 F12P00748 615 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 ZNF43P17038 809 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 GTF2E2P29084 291 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 UBE2NP61088 152 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 AGBL2Q5U5Z8 902 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 C9orf135Q5VTT2 229 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 FAM91A1Q658Y4 838 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 REEP3Q6NUK4 255 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 ANKRD16Q6P6B7 361 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 SERPINA11Q86U17 422 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 HIPK1Q86Z02 1210 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 EPHX4Q8IUS5 362 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 OR9I1Q8NGQ6 314 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 OR1K1Q8NGR3 316 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 OR6S1Q8NH40 331 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 SPATA3Q8NHX4 192 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 OXGR1Q96P68 337 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 TNFRSF13CQ96RJ3 184 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 KCNS3Q9BQ31 491 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 KATNB1Q9BVA0 655 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 TCF7L2Q9NQB0 619 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 CRNNQ9UBG3 495 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 RCE1Q9Y256 329 aa10.65□□□□□ -0.7
GTF3C1-204ENST00000564664 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 PRORSD1PA6NEY8 169 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 A8MV72 311 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 FTCDNL1E5RQL4 147 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 AIM2O14862 343 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 POLR3GO15318 223 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 AKAP8O43823 692 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SERPINB7O75635 380 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 PDE5AO76074 875 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 CRYAAP02489 173 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 PRG2P13727 222 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SELENOPP49908 381 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 EGR4Q05215 589 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SPOCK1Q08629 439 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 SWI5Q1ZZU3 235 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 TBRG1Q3YBR2 411 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 GTDC1Q4AE62 458 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 RPS26P11Q5JNZ5 115 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 HMBOX1Q6NT76 420 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 NIPAL3Q6P499 406 aa10.64□□□□□ -0.71
GTF3C1-204ENST00000564664 PODNL1Q6PEZ8 512 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms