RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ZIC4Q8N9L1 334 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 GPR32P1Q8NGA4 272 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 RP9Q8TA86 221 aaKnown RBP16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 VANGL1Q8TAA9 524 aaPredicted RBP16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 PIGTQ969N2 578 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 TAAR8Q969N4 342 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF385AQ96PM9 386 aaKnown RBP16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 EPYCQ99645 322 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 SLC7A10Q9NS82 523 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 BEX4Q9NWD9 120 aaPredicted RBP16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 MALT1Q9UDY8 824 aa16.18■□□□□ 0.18
SYNGR3-204ENST00000564642 A0A0B4J2E0 115 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 A0A1B0GX12 115 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 OR5H1A6NKK0 313 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 FMO6PO60774 539 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 KRT33AO76009 404 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 PLAUP00749 431 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CD3EP07766 207 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CBLP22681 906 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CDH12P55289 794 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 NRF1Q16656 503 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 NCMAPQ5T1S8 102 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 SWT1Q5T5J6 900 aaKnown RBP16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 TSPO2Q5TGU0 170 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 OR7E24Q6IFN5 339 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF613Q6PF04 617 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CREB3L2Q70SY1 520 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CCDC80Q76M96 950 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CALHM3Q86XJ0 350 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 P3H2Q8IVL5 708 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 POU5F2Q8N7G0 328 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 POMGNT2Q8NAT1 580 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 OR6T1Q8NGN1 323 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 TAMM41Q96BW9 452 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 RCN3Q96D15 328 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF583Q96ND8 569 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 CCL19Q99731 98 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 ELAC2Q9BQ52 826 aaKnown RBP16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 SLCO5A1Q9H2Y9 848 aa16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 HRNRQ86YZ3 2850 aaPredicted RBP16.17■□□□□ 0.18
SYNGR3-204ENST00000564642 IGKV1D-42A0A075B6H8 117 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 CPSF4LA6NMK7 179 aaKnown RBP16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 AIM2O14862 343 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 IFNA14P01570 189 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF43P17038 809 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 CD247P20963 164 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 IL1RL1Q01638 556 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 TGFBR3Q03167 851 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 VEZF1Q14119 521 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 MFSD13AQ14CX5 517 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 ENTPD8Q5MY95 495 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 C9orf135Q5VTT2 229 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 H1FNTQ75WM6 255 aaPredicted RBP16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 SPATA21Q7Z572 469 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 ABHD12BQ7Z5M8 362 aaPredicted RBP16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 KDM8Q8N371 416 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 OR52N5Q8NH56 324 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 PROX1Q92786 737 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 OXGR1Q96P68 337 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 TMEM204Q9BSN7 226 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 B3GALT5Q9Y2C3 310 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 RNF115Q9Y4L5 304 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 DNHD1Q96M86 4753 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 DSCAMO60469 2012 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 PRR14LQ5THK1 2151 aa16.16■□□□□ 0.18
SYNGR3-204ENST00000564642 RAI1Q7Z5J4 1906 aaPredicted RBP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 M0R082 166 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 CLOCKO15516 846 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 SMPD2O60906 423 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 ITGA5P08648 1049 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 COX4I1P13073 169 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 MPGP29372 298 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 SEC24CP53992 1094 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 FOXG1P55316 489 aaPredicted RBP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 C1DQ13901 141 aaKnown RBP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 GABRA6Q16445 453 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 NIPAL3Q6P499 406 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 EPHX4Q8IUS5 362 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 C10orf53Q8N6V4 93 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 OR6S1Q8NH40 331 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF417Q8TAU3 575 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 AKAP1Q92667 903 aaKnown RBP eCLIP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 MUS81Q96NY9 551 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 ZNF587Q96SQ5 575 aaPredicted RBP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 PIP5K1AQ99755 562 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 TMEM43Q9BTV4 400 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 ASPNQ9BXN1 380 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 NSRP1Q9H0G5 558 aaKnown RBP16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 BAG5Q9UL15 447 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 USP22Q9UPT9 525 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 AP3M1Q9Y2T2 418 aa16.15■□□□□ 0.18
SYNGR3-204ENST00000564642 AKAP9Q99996 3911 aa16.14■□□□□ 0.18
SYNGR3-204ENST00000564642 PRRC2AP48634 2157 aaKnown RBP16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 DPRXA6NFQ7 191 aa16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 OR6C65A6NJZ3 312 aa16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 FAM220BPB1ANY3 271 aa16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 PDLIM1O00151 329 aa16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 HS3ST1O14792 307 aa16.14■□□□□ 0.17
SYNGR3-204ENST00000564642 CHP2O43745 196 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms