RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 M0R082 166 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 FFAR1O14842 300 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 GSTA4O15217 222 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 PRSS23O95084 383 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 HPRP00739 348 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 SERPINA1P01009 418 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 IFNA14P01570 189 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 THBDP07204 575 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 EPXP11678 715 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 POU2F1P14859 743 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 GRPRP30550 384 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 PEX19P40855 299 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 FOXG1P55316 489 aaPredicted RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 TSC22D1Q15714 1073 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 MS4A18Q3C1V0 323 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 FAM69AQ5T7M9 428 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 GLYATQ6IB77 296 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 C5orf46Q6UWT4 87 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 DEF8Q6ZN54 512 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 BEND4Q6ZU67 534 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 CREB3L2Q70SY1 520 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 CXorf67Q86X51 503 aaPredicted RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 EPHX4Q8IUS5 362 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 NKAIN4Q8IVV8 208 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 WDFY1Q8IWB7 410 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 DEFB107AQ8IZN7 70 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 KDM8Q8N371 416 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 FAM86B1Q8N7N1 296 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 ZNF454Q8N9F8 522 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 OR9K2Q8NGE7 335 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 ZNF417Q8TAU3 575 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 BCAS4Q8TDM0 211 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 SLC25A36Q96CQ1 311 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 SLC41A3Q96GZ6 507 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 HSH2DQ96JZ2 352 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 MOGAT1Q96PD6 335 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 ZNF385AQ96PM9 386 aaKnown RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 ZNF587Q96SQ5 575 aaPredicted RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 SF3B5Q9BWJ5 86 aaKnown RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 TAPBPLQ9BX59 468 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 MEPEQ9NQ76 525 aaPredicted RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 MAN2C1Q9NTJ4 1040 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 DCAF13Q9NV06 445 aaKnown RBP7.56□□□□□ -1.2
UBR1-204ENST00000563239 EMC3Q9P0I2 261 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 RIMS3Q9UJD0 308 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 SLC7A7Q9UM01 511 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 A4GNTQ9UNA3 340 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 MPDZO75970 2070 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 FREM1Q5H8C1 2179 aa7.56□□□□□ -1.2
UBR1-204ENST00000563239 AKAP9Q99996 3911 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 CACNA1DQ01668 2161 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SH3D21A4FU49 640 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 J3KTA2 159 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 PDLIM1O00151 329 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 GPR171O14626 319 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SIAH2O43255 324 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 OR2T1O43869 369 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 CTAG2O75638 210 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 OR5F1O95221 314 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 ZNF682O95780 498 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 ADAP00813 363 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SEMG1P04279 462 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 TCN1P20061 433 aaPredicted RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 PSMB1P20618 241 aaKnown RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 CALB2P22676 271 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 CBLP22681 906 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SSTR2P30874 369 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 MNAT1P51948 309 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 UGT2B15P54855 530 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
UBR1-204ENST00000563239 TLE4Q04727 773 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 POU4F3Q15319 338 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 ZNF74Q16587 644 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 IQCCQ4KMZ1 466 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SAMD4BQ5PRF9 694 aaKnown RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 ANKRD34AQ69YU3 496 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 C16orf89Q6UX73 402 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 Q6ZT83 130 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 H1FNTQ75WM6 255 aaPredicted RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 ADPRHL1Q8NDY3 354 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 TMEM255BQ8WV15 326 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 FAM162AQ96A26 154 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 TMEM45BQ96B21 275 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 MPP4Q96JB8 637 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 DACH2Q96NX9 599 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 KLHL4Q9C0H6 718 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 POLR2J2Q9GZM3 115 aaKnown RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 POLR2J3Q9H1A7 115 aaKnown RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 GORASP2Q9H8Y8 452 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 MCCC2Q9HCC0 563 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 TAS2R1Q9NYW7 299 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 SELENONQ9NZV5 590 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 RASD1Q9Y272 281 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 B3GALT5Q9Y2C3 310 aa7.55□□□□□ -1.2
UBR1-204ENST00000563239 NOSIPQ9Y314 301 aaKnown RBP7.55□□□□□ -1.2
UBR1-204ENST00000563239 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms