RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 CREB3L2Q70SY1 520 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 ANKRD46Q86W74 232 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 PEX5LQ8IYB4 626 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 TCP10LQ8TDR4 215 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 ZMYND19Q96E35 227 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 DOK1Q99704 481 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
HERPUD1-205ENST00000562914 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 B4DSR2 109 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 RPL36A-HNRNPH2H7BZ11 118 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 CBR1P16152 277 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 ARR3P36575 388 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 RIN1Q13671 783 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 WBP2NLQ6ICG8 309 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 GSPT2Q8IYD1 628 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 UBASH3BQ8TF42 649 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 CCDC115Q96NT0 180 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 ALKBH3Q96Q83 286 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 AKTIPQ9H8T0 292 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 DYNLRB1Q9NP97 96 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 ADPRHL2Q9NX46 363 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 RCE1Q9Y256 329 aa13.65□□□□□ -0.22
HERPUD1-205ENST00000562914 TLDC2A0PJX2 215 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 E9PBE3 544 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 BPGMP07738 259 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 TFPTP0C1Z6 253 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 MYZAPP0CAP1 466 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 NR2F1P10589 423 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 IFNGR1P15260 489 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 CFPP27918 469 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 CALCRP30988 508 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 S100A3P33764 101 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 EVX1P49640 407 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 SELENOPP49908 381 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 P2RY4P51582 365 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 SYPL1Q16563 259 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 PRAMEF8Q5VWM4 474 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 PRAMEF7Q5VXH5 474 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 NIPAL3Q6P499 406 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 SPATA21Q7Z572 469 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 HMGN2P46Q86SG4 172 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 RNF130Q86XS8 419 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 TEX29Q8N6K0 151 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 ANKFN1Q8N957 763 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 SNX18Q96RF0 628 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 PLA2G12AQ9BZM1 189 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 CALML5Q9NZT1 146 aa13.64□□□□□ -0.23
HERPUD1-205ENST00000562914 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 FRS3O43559 492 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 SPRY1O43609 319 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 CHRM4P08173 479 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 THBS4P35443 961 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 ROR2Q01974 943 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 HGFACQ04756 655 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 ADRM1Q16186 407 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 LIN52Q52LA3 116 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 SPANXN4Q5MJ08 99 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 C1orf140Q5VVS0 124 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 REP15Q6BDI9 236 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 GLCCI1Q86VQ1 547 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 MFSD8Q8NHS3 518 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 STK35Q8TDR2 534 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 CKAP2Q8WWK9 683 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 PANX1Q96RD7 426 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 NELFAQ9H3P2 528 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 MS4A5Q9H3V2 200 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-205ENST00000562914 A0A096LPE4 126 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 IGHV2OR16-5A0A0B4J2B6 119 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 A0A1W2PPZ6 126 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 CCDC154A6NI56 674 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 NR5A2O00482 541 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 NPIPB7O75200 414 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 SPAG7O75391 227 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 UPK3AO75631 287 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 ZNF43P17038 809 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 IL2RGP31785 369 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 COMPP49747 757 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 FAM174BQ3ZCQ3 159 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 SLC9B1Q4ZJI4 515 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 RNF220Q5VTB9 566 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 EPHX4Q8IUS5 362 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 NUDCD3Q8IVD9 361 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 SGMS2Q8NHU3 365 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 USP22Q9UPT9 525 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 SPEF1Q9Y4P9 236 aa13.62□□□□□ -0.23
HERPUD1-205ENST00000562914 TMEM129A0AVI4 362 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 AKAP8O43823 692 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 SLC43A1O75387 559 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 AHSA1O95433 338 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 KRT75O95678 551 aa13.61□□□□□ -0.23
HERPUD1-205ENST00000562914 TFP02787 698 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms