RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 NELFBQ8WX92 580 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 OSTF1Q92882 214 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 CPNE4Q96A23 557 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 REXO5Q96IC2 774 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 C18orf15Q96N68 181 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 RNF157Q96PX1 679 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 FMO2Q99518 471 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 TTC1Q99614 292 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 CHP1Q99653 195 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 HAUS8Q9BT25 410 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 LYRM4Q9HD34 91 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 SLC7A10Q9NS82 523 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 INTS10Q9NVR2 710 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 PIH1D1Q9NWS0 290 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 TAB2Q9NYJ8 693 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 UBAP1Q9NZ09 502 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 H2AFY2Q9P0M6 372 aaPredicted RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 DKK2Q9UBU2 259 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 MALT1Q9UDY8 824 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 UTP11Q9Y3A2 253 aaKnown RBP4.79□□□□□ -1.64
TCF4-213ENST00000562543 CHST2Q9Y4C5 530 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
TCF4-213ENST00000562543 TANC2Q9HCD6 1990 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 MACROD2A1Z1Q3 448 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 VSTM5A8MXK1 200 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PRR23D1E9PI22 279 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 PGRMC1O00264 195 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 RNASET2O00584 256 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 ACOX3O15254 700 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PHGDHO43175 533 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 GMFGO60234 142 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 IGHV3-9P01782 118 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 OPN1LWP04000 364 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
TCF4-213ENST00000562543 PRR23D2P0DMB1 279 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 CHN1P15882 459 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 GALNSP34059 522 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 CRYBB2P43320 205 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ALDH3B1P43353 468 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 FOXA1P55317 472 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 NHLH2Q02577 135 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SLC34A1Q06495 639 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 TP53BP2Q13625 1128 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PDK2Q15119 407 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 UAP1Q16222 522 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 NDUFA5Q16718 116 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ADPRMQ3LIE5 342 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ACSBG2Q5FVE4 666 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 TNFAIP8L3Q5GJ75 292 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PDSS1Q5T2R2 415 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 LGSNQ5TDP6 509 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ASPHD1Q5U4P2 390 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 THOC7Q6I9Y2 204 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 AFTPHQ6ULP2 937 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PPP1R21Q6ZMI0 780 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 LINC00336Q6ZUF6 198 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 PID1Q7Z2X4 250 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 LRRC34Q8IZ02 419 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ZNF101Q8IZC7 436 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SYCE1Q8N0S2 351 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SCAIQ8N9R8 606 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SPERTQ8NA61 448 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 OR13J1Q8NGT2 312 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 TRPC4APQ8TEL6 797 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 UBLCP1Q8WVY7 318 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 CTNNBL1Q8WYA6 563 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 ZNF75CPQ92670 426 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 RIT1Q92963 219 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SLC35A4Q96G79 324 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ZNF184Q99676 751 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 MAPKAP1Q9BPZ7 522 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 ELAC2Q9BQ52 826 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 PELOQ9BRX2 385 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 TXLNGYQ9BZA5 131 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 MRPL37Q9BZE1 423 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 DPH5Q9H2P9 285 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 DPAGT1Q9H3H5 408 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SCRT2Q9NQ03 307 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 NMRK1Q9NWW6 199 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 MED11Q9P086 117 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 KLHL9Q9P2J3 617 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 STX18Q9P2W9 335 aaKnown RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.78□□□□□ -1.64
TCF4-213ENST00000562543 IL20RAQ9UHF4 553 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 SMAD5-AS1Q9Y6J3 95 aa4.78□□□□□ -1.64
TCF4-213ENST00000562543 LRIT2A6NDA9 550 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 LSM1O15116 133 aaKnown RBP4.77□□□□□ -1.65
TCF4-213ENST00000562543 RAD51CO43502 376 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 AKR1B10O60218 316 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 ANXA9O76027 345 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 LY86O95711 162 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 GAS8O95995 478 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 QDPRP09417 244 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 CECR9P0C854 216 aa4.77□□□□□ -1.65
TCF4-213ENST00000562543 RPS3P23396 243 aaKnown RBP eCLIP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms