RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 IQCF3P0C7M6 154 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RBMY1DP0C7P1 496 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RBMY1A1P0DJD3 496 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 ADRB3P13945 408 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 ABOP16442 354 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 NPR2P20594 1047 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CMA1P23946 247 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 FMO3P31513 532 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 OTX2P32243 289 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 ARRB1P49407 418 aaPredicted RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 HERVK_113P61574 105 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RPS14P62263 151 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 KLHL30Q0D2K2 578 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 GGTLC2Q14390 218 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CYTH1Q15438 398 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 LRRC10Q5BKY1 277 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 MARCH8Q5T0T0 291 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 GPR157Q5UAW9 335 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CTRB2Q6GPI1 263 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 SLC25A24Q6NUK1 477 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CES3Q6UWW8 571 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CAMK2N1Q7Z7J9 78 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 MFSD6LQ8IWD5 586 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 ZNF721Q8TF20 911 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RLN3Q8WXF3 142 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 NDRG1Q92597 394 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 EFHD2Q96C19 240 aaPredicted RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 FCRL1Q96LA6 429 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RNF2Q99496 336 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 MRPL45Q9BRJ2 306 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 SLC17A9Q9BYT1 436 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 ACTR6Q9GZN1 396 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 RNF167Q9H6Y7 350 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 PATZ1Q9HBE1 687 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 EML4Q9HC35 981 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 THUMPD1Q9NXG2 353 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 QPCTLQ9NXS2 382 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 KCNIP1Q9NZI2 227 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 SH3BGRL2Q9UJC5 107 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 MRPS7Q9Y2R9 242 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 DDX49Q9Y6V7 483 aaKnown RBP1.88□□□□□ -2.11
DENND4A-205ENST00000562540 FRMPD3Q5JV73 1810 aa1.88□□□□□ -2.11
DENND4A-205ENST00000562540 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 IGHV3-64DA0A0J9YX35 117 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 TMX2-CTNND1H3BSU7 103 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PES1O00541 588 aaKnown RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PRRG1O14668 218 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SNAI2O43623 268 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 GMFGO60234 142 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SCGNO76038 276 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 HNF1AP20823 631 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 IL12AP29459 219 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 LONP1P36776 959 aaKnown RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SLC26A3P40879 764 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 LHX2P50458 406 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 CCR6P51684 374 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PAX5Q02548 391 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 KIAA0087Q14695 138 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PSG5Q15238 335 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 TSPO2Q5TGU0 170 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ZNF620Q6ZNG0 422 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 LINC01551Q86U37 167 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ZNF546Q86UE3 836 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PAQR7Q86WK9 346 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ACOT4Q8N9L9 421 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 CCDC54Q8NEL0 328 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 OR2T34Q8NGX1 318 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ACER1Q8TDN7 264 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 TMEM158Q8WZ71 300 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 UFD1Q92890 307 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 CMTM7Q96FZ5 175 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 RNF185Q96GF1 192 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ITCHQ96J02 903 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 TTC25Q96NG3 672 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SECISBP2Q96T21 854 aaKnown RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PELOQ9BRX2 385 aaKnown RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 HDHD3Q9BSH5 251 aaPredicted RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 VCXQ9H320 206 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SRMSQ9H3Y6 488 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 CCL28Q9NRJ3 127 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PDS5BQ9NTI5 1447 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 HOXC10Q9NYD6 342 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 BFARQ9NZS9 450 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 DEC1Q9P2X7 70 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ISY1Q9ULR0 285 aaKnown RBP1.87□□□□□ -2.11
DENND4A-205ENST00000562540 PSG11Q9UQ72 335 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 TP53TG5Q9Y2B4 290 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 SLC25A15Q9Y619 301 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 ASTN1O14525 1302 aa1.87□□□□□ -2.11
DENND4A-205ENST00000562540 IGLV4-69A0A075B6H9 119 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.86□□□□□ -2.11
DENND4A-205ENST00000562540 IGKV2D-24A0A075B6R9 120 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 A0A0G2JLM5 398 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 A0A0G2JN53 185 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 TCRBV9S1A1TA0A576 114 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 C12orf71A8MTZ7 269 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 NDC80O14777 642 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 ARPC3O15145 178 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 MAGEB3O15480 346 aa1.86□□□□□ -2.11
DENND4A-205ENST00000562540 RHOBTB1O94844 696 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms