RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 OR2B2Q9GZK3 357 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 NDUFA13Q9P0J0 144 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 WASF3Q9UPY6 502 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 CACNA1GO43497 2377 aa12.89□□□□□ -0.35
COMMD4-205ENST00000562310 DMXL1Q9Y485 3027 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 A6NHS1 94 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 LIPT2A6NK58 231 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 A6NL46 340 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 KLK10O43240 276 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 OR6A2O95222 327 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 WISP1O95388 367 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 TXNDC12O95881 172 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 CDK1P06493 297 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 HTR1AP08908 422 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 DBTP11182 482 aaKnown RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 SLC15A1P46059 708 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 MLLT10P55197 1068 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 ARG2P78540 354 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 PMS2P3Q13401 168 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 AADACL4Q5VUY2 407 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 C1QL3Q5VWW1 255 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 SLC6A19Q695T7 634 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 SLC25A25Q6KCM7 469 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 SPARTQ8N0X7 666 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 LRRC75AQ8NAA5 344 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 C9orf43Q8TAL5 461 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 HAS2Q92819 552 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 GGHQ92820 318 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 NPAS1Q99742 590 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 CCDC90BQ9GZT6 254 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 FAM192AQ9GZU8 254 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 INIPQ9NRY2 104 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 DEPPQ9NTK1 212 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 H2AFY2Q9P0M6 372 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-205ENST00000562310 ERVK-18Q9QC07 812 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 GPR52Q9Y2T5 361 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
COMMD4-205ENST00000562310 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 SMIM31A0A1B0GVY4 71 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 OR2M5A3KFT3 312 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 NPIPB13A6NJU9 1138 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 NPIPB4C9JG80 1138 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 H3BML4 177 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 M0R082 166 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 EFNA2O43921 213 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ZIC3O60481 467 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 CEACAM4O75871 244 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 F10P00742 488 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 IGHMP01871 453 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 MT-ND2P03891 347 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 SP1P08047 785 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ACVR2AP27037 513 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 HTR1FP30939 366 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 SDHAP31040 664 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 TTKP33981 857 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 CDH11P55287 796 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 CTXN1P60606 82 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 GPR85P60893 370 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 FOXO1Q12778 655 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 RAB40BQ12829 278 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ZP4Q12836 540 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 MYBPHQ13203 477 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 OR7A5Q15622 319 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 SLC35F1Q5T1Q4 408 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 IGFL2Q6UWQ7 119 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 IGFN1Q86VF2 1251 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 TMEM178AQ8NBL3 297 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 FAM98AQ8NCA5 519 aaKnown RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF417Q8TAU3 575 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 ZNF587Q96SQ5 575 aaPredicted RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 TUBA1CQ9BQE3 449 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 HINT3Q9NQE9 182 aaKnown RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 MRPS18AQ9NVS2 196 aaKnown RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 PLA2G3Q9NZ20 509 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
COMMD4-205ENST00000562310 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
COMMD4-205ENST00000562310 TRAPPC4Q9Y296 219 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms