RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.89□□□□□ -0.352e-7■■■■□ 25.8
CNN2-204ENST00000562075 FN3KQ9H479 309 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 ZNF552Q9H707 407 aaPredicted RBP12.89□□□□□ -0.35
CNN2-204ENST00000562075 TMEM185BQ9H7F4 350 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 H2AFY2Q9P0M6 372 aaPredicted RBP12.89□□□□□ -0.35
CNN2-204ENST00000562075 KLHL21Q9UJP4 597 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 WASF3Q9UPY6 502 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
CNN2-204ENST00000562075 MSRB2Q9Y3D2 182 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 RPL36Q9Y3U8 105 aaKnown RBP12.89□□□□□ -0.35
CNN2-204ENST00000562075 CORINQ9Y5Q5 1042 aa12.89□□□□□ -0.35
CNN2-204ENST00000562075 OR2M5A3KFT3 312 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 DPPA5A6NC42 116 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 PINLYPA6NC86 204 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 M0R082 166 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 M0R3G1 203 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 PRODHO43272 600 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 EFSO43281 561 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 IDH3BO43837 385 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 NME2P1O60361 137 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 MT-ND2P03891 347 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 TFAP2AP05549 437 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SP1P08047 785 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 CD14P08571 375 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 HTR1AP08908 422 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 TSPAN19P0C672 248 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 CD46P15529 392 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 NME2P22392 152 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SFTPDP35247 375 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 CLK1P49759 484 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 CTXN1P60606 82 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 ZNF91Q05481 1191 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 FOXO1Q12778 655 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 MYBPHQ13203 477 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 CPOQ8IVL8 374 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SULF2Q8IWU5 870 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SPARTQ8N0X7 666 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 STX19Q8N4C7 294 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SVOPQ8N4V2 548 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 LRRC75AQ8NAA5 344 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 FDCSPQ8NFU4 85 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 ZNF417Q8TAU3 575 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 RFKQ969G6 155 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 ZNF587Q96SQ5 575 aaPredicted RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 ALKBH4Q9NXW9 302 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 CNOT2Q9NZN8 540 aaKnown RBP12.88□□□□□ -0.35
CNN2-204ENST00000562075 B4GALT7Q9UBV7 327 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 SEC14L4Q9UDX3 406 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 ADAM18Q9Y3Q7 739 aa12.88□□□□□ -0.35
CNN2-204ENST00000562075 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 LIPT2A6NK58 231 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 C11orf98E9PRG8 122 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 PLPP3O14495 311 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 ARPC3O15145 178 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 RNF13O43567 381 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 TRAPPC6AO75865 159 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 OPN1LWP04000 364 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 F13BP05160 661 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 CDK1P06493 297 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 RFPL3SP0C7P2 107 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 ADORA3P0DMS8 318 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 DBTP11182 482 aaKnown RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 IMPDH2P12268 514 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 HIST1H1CP16403 213 aaKnown RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 ACVR2AP27037 513 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 CDH11P55287 796 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 OR2B6P58173 313 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNN2-204ENST00000562075 TMEM176BQ3YBM2 270 aaPredicted RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 YRDCQ86U90 279 aaKnown RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 GID4Q8IVV7 300 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 FAM83FQ8NEG4 500 aaPredicted RBP12.87□□□□□ -0.35
CNN2-204ENST00000562075 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 HAS2Q92819 552 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 OR2B2Q9GZK3 357 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
CNN2-204ENST00000562075 INIPQ9NRY2 104 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms