RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DLEU7Q6UYE1 221 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 CREB3L2Q70SY1 520 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 HDXQ7Z353 690 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 DTX2Q86UW9 622 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 EPHX4Q8IUS5 362 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 KDM8Q8N371 416 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 POMGNT2Q8NAT1 580 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 C1orf162Q8NEQ5 155 aaPredicted RBP9.02□□□□□ -0.97
CLK3-205ENST00000561673 MFSD8Q8NHS3 518 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 CKAP2Q8WWK9 683 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 SLC25A36Q96CQ1 311 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 KTI12Q96EK9 354 aaPredicted RBP9.02□□□□□ -0.97
CLK3-205ENST00000561673 THOC1Q96FV9 657 aaKnown RBP9.02□□□□□ -0.97
CLK3-205ENST00000561673 PTDSS2Q9BVG9 487 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 SLCO5A1Q9H2Y9 848 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 SLC17A5Q9NRA2 495 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 INTS9Q9NV88 658 aaKnown RBP9.02□□□□□ -0.97
CLK3-205ENST00000561673 FAIMQ9NVQ4 179 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 TMEM45AQ9NWC5 275 aa9.02□□□□□ -0.97
CLK3-205ENST00000561673 GDF2Q9UK05 429 aaPredicted RBP9.02□□□□□ -0.97
CLK3-205ENST00000561673 ELOA3DA6NLF2 546 aaPredicted RBP9.01□□□□□ -0.97
CLK3-205ENST00000561673 HMGB1P1B2RPK0 211 aaPredicted RBP9.01□□□□□ -0.97
CLK3-205ENST00000561673 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 VAMP5O95183 116 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 AHSA1O95433 338 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 IGHV4-39P01824 125 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 GPX2P18283 190 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 CDH2P19022 906 aaPredicted RBP9.01□□□□□ -0.97
CLK3-205ENST00000561673 HTR2AP28223 471 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 TTKP33981 857 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 ACVR1BP36896 505 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 SELENOPP49908 381 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 IRX1P78414 480 aaPredicted RBP9.01□□□□□ -0.97
CLK3-205ENST00000561673 VEZF1Q14119 521 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 ETFDHQ16134 617 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 ELOA3BQ3SY89 546 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 HIKESHIQ53FT3 197 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 AGAP6Q5VW22 663 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 C6orf89Q6UWU4 347 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 KRT73Q86Y46 540 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 C17orf78Q8N4C9 275 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 LSMEM1Q8N8F7 131 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 MAPK1IP1LQ8NDC0 245 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 ELOA3Q8NG57 546 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 TAAR8Q969N4 342 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 BOD1Q96IK1 185 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 MAGEB18Q96M61 343 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 DHRS9Q9BPW9 319 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 TMEM38AQ9H6F2 299 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 C12orf10Q9HB07 376 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 RPS6KB2Q9UBS0 482 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 SEC14L4Q9UDX3 406 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
CLK3-205ENST00000561673 POU2F3Q9UKI9 436 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 RASD1Q9Y272 281 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 B3GALT5Q9Y2C3 310 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 AMDHD2Q9Y303 409 aa9.01□□□□□ -0.97
CLK3-205ENST00000561673 NAV3Q8IVL0 2385 aa9□□□□□ -0.97
CLK3-205ENST00000561673 CADP27708 2225 aa9□□□□□ -0.97
CLK3-205ENST00000561673 IGKV1D-42A0A075B6H8 117 aa9□□□□□ -0.97
CLK3-205ENST00000561673 A0A1B0GWA3 101 aa9□□□□□ -0.97
CLK3-205ENST00000561673 EVPLLA8MZ36 301 aa9□□□□□ -0.97
CLK3-205ENST00000561673 KRT33AO76009 404 aa9□□□□□ -0.97
CLK3-205ENST00000561673 LGI1O95970 557 aa9□□□□□ -0.97
CLK3-205ENST00000561673 PNMTP11086 282 aa9□□□□□ -0.97
CLK3-205ENST00000561673 SLC6A2P23975 617 aa9□□□□□ -0.97
CLK3-205ENST00000561673 PCSK6P29122 969 aa9□□□□□ -0.97
CLK3-205ENST00000561673 AQP1P29972 269 aa9□□□□□ -0.97
CLK3-205ENST00000561673 FABP6P51161 128 aa9□□□□□ -0.97
CLK3-205ENST00000561673 PRPS1P60891 318 aa9□□□□□ -0.97
CLK3-205ENST00000561673 SCARB2Q14108 478 aa9□□□□□ -0.97
CLK3-205ENST00000561673 RUNDC3AQ59EK9 446 aa9□□□□□ -0.97
CLK3-205ENST00000561673 C11orf71Q6IPW1 123 aa9□□□□□ -0.97
CLK3-205ENST00000561673 NIPAL3Q6P499 406 aa9□□□□□ -0.97
CLK3-205ENST00000561673 B3GLCTQ6Y288 498 aa9□□□□□ -0.97
CLK3-205ENST00000561673 DNM1P46Q6ZS02 220 aa9□□□□□ -0.97
CLK3-205ENST00000561673 LINGO2Q7L985 606 aa9□□□□□ -0.97
CLK3-205ENST00000561673 ABHD12BQ7Z5M8 362 aaPredicted RBP9□□□□□ -0.97
CLK3-205ENST00000561673 DEPDC4Q8N2C3 294 aa9□□□□□ -0.97
CLK3-205ENST00000561673 MUC15Q8N387 334 aa9□□□□□ -0.97
CLK3-205ENST00000561673 DNAJA4Q8WW22 397 aaPredicted RBP9□□□□□ -0.97
CLK3-205ENST00000561673 STON2Q8WXE9 905 aa9□□□□□ -0.97
CLK3-205ENST00000561673 ZNF607Q96SK3 696 aa9□□□□□ -0.97
CLK3-205ENST00000561673 WFDC6Q9BQY6 131 aa9□□□□□ -0.97
CLK3-205ENST00000561673 CPPED1Q9BRF8 314 aaPredicted RBP9□□□□□ -0.97
CLK3-205ENST00000561673 SPATA5L1Q9BVQ7 753 aa9□□□□□ -0.97
CLK3-205ENST00000561673 REG4Q9BYZ8 158 aa9□□□□□ -0.97
CLK3-205ENST00000561673 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
CLK3-205ENST00000561673 ZNF385DQ9H6B1 395 aa9□□□□□ -0.97
CLK3-205ENST00000561673 VIPAS39Q9H9C1 493 aa9□□□□□ -0.97
CLK3-205ENST00000561673 CORO2BQ9UQ03 480 aa9□□□□□ -0.97
CLK3-205ENST00000561673 FN1P02751 2386 aaKnown RBP9□□□□□ -0.97
CLK3-205ENST00000561673 SVEP1Q4LDE5 3571 aa8.99□□□□□ -0.97
CLK3-205ENST00000561673 CUBNO60494 3623 aa8.99□□□□□ -0.97
CLK3-205ENST00000561673 TRAV36DV7A0A075B6V5 113 aa8.99□□□□□ -0.97
CLK3-205ENST00000561673 PRORSD1PA6NEY8 169 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms