RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ETV1P50549 477 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 AP2S1P53680 142 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 SLC16A1P53985 500 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 CDH11P55287 796 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 VLDLRP98155 873 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 LOXL1Q08397 574 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 SCRN3Q0VDG4 424 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 MRPL28Q13084 256 aaKnown RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 PPA1Q15181 289 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 ARL13AQ5H913 290 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 C6orf52Q5T4I8 152 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 THSD4Q6ZMP0 1018 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 SZRD1Q7Z422 152 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 SNX32Q86XE0 403 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 C10orf107Q8IVU9 208 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PHC2Q8IXK0 858 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 ZNF619Q8N2I2 560 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 ZNF433Q8N7K0 673 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 MAPK1IP1LQ8NDC0 245 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 RBM15BQ8NDT2 890 aaKnown RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 OR10Z1Q8NGY1 313 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 ADAMTS16Q8TE57 1224 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 SLC25A43Q8WUT9 341 aaPredicted RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 TWIST2Q8WVJ9 160 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 MOAP1Q96BY2 351 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PPP3R2Q96LZ3 170 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 C1orf50Q9BV19 199 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 CADM1Q9BY67 442 aaKnown RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 AMBRA1Q9C0C7 1298 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 LAT2Q9GZY6 243 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 C1orf21Q9H246 121 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 C12orf65Q9H3J6 166 aaKnown RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 IFT22Q9H7X7 185 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PPP1R14DQ9NXH3 145 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 CISD1Q9NZ45 108 aaKnown RBP7.41□□□□□ -1.22
PALB2-202ENST00000561514 MALT1Q9UDY8 824 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 TBK1Q9UHD2 729 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 LGALS13Q9UHV8 139 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PRSS50Q9UI38 385 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 KCNE5Q9UJ90 142 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 KCNE3Q9Y6H6 103 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 CEPT1Q9Y6K0 416 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 SVEP1Q4LDE5 3571 aa7.41□□□□□ -1.22
PALB2-202ENST00000561514 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.4□□□□□ -1.221e-8■□□□□ 10.4
PALB2-202ENST00000561514 IGHV4-30-2A0A087WSY4 118 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NPIPA5A0A0B4J1W7 369 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 A0A0B4J203 849 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 TMEM120BA0PK00 339 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 SERINC4A6NH21 518 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 ZNF716A6NP11 495 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 A8MV72 311 aaPredicted RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 TMEM233B4DJY2 109 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NPIPA7E9PJI5 369 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 H7C417 338 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 COPEO14579 308 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 PIP5K1BO14986 540 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 ZNF264O43296 627 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 DNPH1O43598 174 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 TRIM13O60858 407 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 RAMP1O60894 148 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NOL3O60936 208 aaKnown RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 LYZL6O75951 148 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 F12P00748 615 aaPredicted RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 IFNA2P01563 188 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 TP53P04637 393 aaPredicted RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 CHRNGP07510 517 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 LINC00032P0C843 101 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 FAM157CP0CG43 387 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NPIPA8P0DM63 369 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 T-ENOLP0DO92 83 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 GGT1P19440 569 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 EFNA1P20827 205 aaPredicted RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 MAPK1P28482 360 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 SLC7A1P30825 629 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 ALDH3B2P48448 385 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 DSCR9P59020 149 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 MRPS15P82914 257 aaKnown RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 PLAURQ03405 335 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 RASGEF1BQ0VAM2 473 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 CBFBQ13951 182 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 GNA13Q14344 377 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 PTGR1Q14914 329 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 OXA1LQ15070 435 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 QPRTQ15274 297 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NPTX1Q15818 432 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NDUFAF6Q330K2 333 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 HMBOX1Q6NT76 420 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 CORO6Q6QEF8 472 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 FIP1L1Q6UN15 594 aaKnown RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 TMPPEQ6ZT21 453 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 USP43Q70EL4 1123 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 GALNT5Q7Z7M9 940 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 OR7A2PQ8NGA2 310 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 OR2W6PQ8NHA6 318 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 ENKURQ8TC29 256 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 ADAMTS15Q8TE58 950 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 NANOS1Q8WY41 292 aaKnown RBP7.4□□□□□ -1.22
PALB2-202ENST00000561514 PMM1Q92871 262 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 BOD1Q96IK1 185 aa7.4□□□□□ -1.22
PALB2-202ENST00000561514 TXNDC15Q96J42 360 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms