RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 CLPXO76031 633 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 OPN1MWP04001 364 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 FAM153BP0C7A2 387 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 OPN1MW2P0DN77 364 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 OPN1MW3P0DN78 364 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 GLRXP35754 106 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 APOBEC1P41238 236 aaKnown RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 MAP3K8P41279 467 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 MAGEB1P43366 347 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 ASMTP46597 345 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 SERPINB9P50453 376 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 BTKQ06187 659 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 TRMT5Q32P41 509 aaKnown RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 PCGF3Q3KNV8 242 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 FAM153CQ494X1 144 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 KLHL26Q53HC5 615 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 CDC73Q6P1J9 531 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 LETMD1Q6P1Q0 360 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 ZCCHC12Q6PEW1 402 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 JAZF1Q86VZ6 243 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 PARP8Q8N3A8 854 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 HOXB13Q92826 284 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 BCL2L2Q92843 193 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 OTUB1Q96FW1 271 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 APIPQ96GX9 242 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 NSUN5Q96P11 429 aaKnown RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 PPCSQ9HAB8 311 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 DECR2Q9NUI1 292 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 AURKAIP1Q9NWT8 199 aaPredicted RBP8.12□□□□□ -1.11
HERC1-210ENST00000560897 TMEM181Q9P2C4 612 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 RAB21Q9UL25 225 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 DTNAQ9Y4J8 743 aa8.12□□□□□ -1.11
HERC1-210ENST00000560897 STX16-NPEPL1H3BU86 382 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 MANBAO00462 879 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 STX16O14662 325 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 PDPK1O15530 556 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 RIPK2O43353 540 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 ULK1O75385 1050 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 IGHMP01871 453 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 HMOX2P30519 316 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 LSP1P33241 339 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 CRYBB2P43320 205 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 CLK1P49759 484 aaKnown RBP8.11□□□□□ -1.11
HERC1-210ENST00000560897 ATP12AP54707 1039 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 RPL15P61313 204 aaKnown RBP8.11□□□□□ -1.11
HERC1-210ENST00000560897 CCL8P80075 99 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 RELBQ01201 579 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 SLC17A1Q14916 467 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 ALKBH6Q3KRA9 238 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 C9orf139Q6ZV77 190 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 GPAT4Q86UL3 456 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 CENPLQ8N0S6 344 aaPredicted RBP8.11□□□□□ -1.11
HERC1-210ENST00000560897 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 CDS1Q92903 461 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 KTI12Q96EK9 354 aaPredicted RBP8.11□□□□□ -1.11
HERC1-210ENST00000560897 CENPHQ9H3R5 247 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 MARCH7Q9H992 704 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 ACER3Q9NUN7 267 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 TAS2R7Q9NYW3 318 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 LEF1Q9UJU2 399 aaPredicted RBP8.11□□□□□ -1.11
HERC1-210ENST00000560897 FZR1Q9UM11 496 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 TRAPPC4Q9Y296 219 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 NOTCH3Q9UM47 2321 aa8.11□□□□□ -1.11
HERC1-210ENST00000560897 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 MDFIC2A0A1B0GVS7 189 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 FAM159BA6NKW6 160 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 SMIM23A6NLE4 172 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 TP73O15350 636 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 DHHO43323 396 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ZNF432O94892 652 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ABHD2P08910 425 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 BCKDHAP12694 445 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 CCNA2P20248 432 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ECHS1P30084 290 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 HSD17B3P37058 310 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 SLC3A1Q07837 685 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 PRSS53Q2L4Q9 553 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 SPDYAQ5MJ70 313 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.1□□□□□ -1.11
HERC1-210ENST00000560897 PAQR6Q6TCH4 344 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 CCBE1Q6UXH8 406 aaPredicted RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 USP51Q70EK9 711 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 MDP1Q86V88 176 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 CCDC36Q8IYA8 594 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 LINC01006Q8NI28 216 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ZNF524Q96C55 264 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 DDIT4LQ96D03 193 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 GIMAP5Q96F15 307 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ELMOD3Q96FG2 381 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 C16orf58Q96GQ5 468 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ZNF385AQ96PM9 386 aaKnown RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 STACQ99469 402 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 SF3B5Q9BWJ5 86 aaKnown RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 ACPTQ9BZG2 426 aa8.1□□□□□ -1.11
HERC1-210ENST00000560897 ROPN1BQ9BZX4 212 aaPredicted RBP8.1□□□□□ -1.11
HERC1-210ENST00000560897 OR11A1Q9GZK7 315 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms