RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 FAM91A1Q658Y4 838 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 DHRS4L2Q6PKH6 230 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 ATG4DQ86TL0 474 aaPredicted RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 SERPINA11Q86U17 422 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 RANBP3LQ86VV4 465 aaPredicted RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 SLC30A8Q8IWU4 369 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 TMEM99Q8N816 258 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
TPM1-223ENST00000560445 C3orf49Q96BT1 292 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 SLC7A10Q9NS82 523 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 CBLN4Q9NTU7 201 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 CCDC167Q9P0B6 97 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
TPM1-223ENST00000560445 PRR14LQ5THK1 2151 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 ZNF469Q96JG9 3925 aaPredicted RBP12.37□□□□□ -0.43
TPM1-223ENST00000560445 VSTM5A8MXK1 200 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TMEM229AB2RXF0 380 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 AIM2O14862 343 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 ANGPT2O15123 496 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 ARAFP10398 606 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TTKP33981 857 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 FABP6P51161 128 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 DMTNQ08495 405 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 C1DQ13901 141 aaKnown RBP12.37□□□□□ -0.43
TPM1-223ENST00000560445 PGGHGQ32M88 737 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TTMPQ5BVD1 217 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
TPM1-223ENST00000560445 FAM69AQ5T7M9 428 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 HMBOX1Q6NT76 420 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 ULK3Q6PHR2 472 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 CLEC2AQ6UVW9 174 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 SNX32Q86XE0 403 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 MUC15Q8N387 334 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 CLIP4Q8N3C7 705 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 LSMEM1Q8N8F7 131 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 OR52E4Q8NGH9 312 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TSPEARQ8WU66 669 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 DNAJA3Q96EY1 480 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 SMR3AQ99954 134 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 RHNO1Q9BSD3 238 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 LINC00470Q9BZP3 86 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TMEM38AQ9H6F2 299 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 TMEM27Q9HBJ8 222 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 SLCO1B3Q9NPD5 702 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 NPAP1Q9NZP6 1156 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 LEF1Q9UJU2 399 aaPredicted RBP12.37□□□□□ -0.43
TPM1-223ENST00000560445 B3GALT5Q9Y2C3 310 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 CORINQ9Y5Q5 1042 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 PMF1-BGLAPU3KQ54 211 aa12.37□□□□□ -0.43
TPM1-223ENST00000560445 RAMP1O60894 148 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 NPIPB7O75200 414 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 ENTPD5O75356 428 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 SLC43A1O75387 559 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 C1QCP02747 245 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 EDNRAP25101 427 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 NUDT6P53370 316 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 RGS8P57771 180 aaPredicted RBP12.36□□□□□ -0.43
TPM1-223ENST00000560445 RBBP4Q09028 425 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 TNK1Q13470 666 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 AGKQ53H12 422 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 CCDC36Q8IYA8 594 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 C11orf65Q8NCR3 313 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 ADPRHL1Q8NDY3 354 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
TPM1-223ENST00000560445 MAL2Q969L2 176 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 MAGEB18Q96M61 343 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 ATP23Q9Y6H3 246 aa12.36□□□□□ -0.43
TPM1-223ENST00000560445 TRAV36DV7A0A075B6V5 113 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 CRYAAP02489 173 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 PRG2P13727 222 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 GPX2P18283 190 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 CDKN1AP38936 164 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 SCARB2Q14108 478 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 RAB35Q15286 201 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 ANKRD16Q6P6B7 361 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 CREB3L2Q70SY1 520 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
TPM1-223ENST00000560445 ARMC8Q8IUR7 673 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
TPM1-223ENST00000560445 PIK3C3Q8NEB9 887 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 NEUROG1Q92886 237 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 SLC25A36Q96CQ1 311 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 OXGR1Q96P68 337 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 KATNB1Q9BVA0 655 aa12.35□□□□□ -0.43
TPM1-223ENST00000560445 ASPNQ9BXN1 380 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms