RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ETV2O00321 342 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 TNFAIP8O95379 198 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 NTN1O95631 604 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 OPN1LWP04000 364 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 UBL4AP11441 157 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 PRKCAP17252 672 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 ITGA2P17301 1181 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CDH2P19022 906 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 SHC1P29353 583 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 KHKP50053 298 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CDK6Q00534 326 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CBFBQ13951 182 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 P2RY6Q15077 328 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 RFX4Q33E94 735 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 SAXO2Q658L1 398 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 TMEM154Q6P9G4 183 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CBLN3Q6UW01 205 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 RNF130Q86XS8 419 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 PTOV1Q86YD1 416 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 OR5W2Q8NH69 310 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 OR5K1Q8NHB7 308 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 RASSF5Q8WWW0 418 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 OIT3Q8WWZ8 545 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 ROBO4Q8WZ75 1007 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 AKAP1Q92667 903 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 KISS1RQ969F8 398 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 FBXW5Q969U6 566 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 SLC35G5Q96KT7 338 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 RBM4BQ9BQ04 359 aaKnown RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 KLHDC3Q9BQ90 382 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 RBM4Q9BWF3 364 aaKnown RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CXorf36Q9H7Y0 433 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 BCO1Q9HAY6 547 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 GPATCH2Q9NW75 528 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 SMPD3Q9NY59 655 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-214ENST00000560402 CARD8Q9Y2G2 431 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 JMJD1CQ15652 2540 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 PRR14LQ5THK1 2151 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 DUXAA6NLW8 204 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 SOCS2O14508 198 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF264O43296 627 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 PRSS23O95084 383 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 PLAUP00749 431 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 FESP07332 822 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CD3EP07766 207 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 YES1P07947 543 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 LYNP07948 512 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 UBTFL6P0CB48 400 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ARAFP10398 606 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ETFAP13804 333 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ALDH3A2P51648 485 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 RAC3P60763 192 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 DAG1Q14118 895 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CYBRD1Q53TN4 286 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 NCMAPQ5T1S8 102 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 REEP3Q6NUK4 255 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CCDC80Q76M96 950 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
SMAD3-214ENST00000560402 KRT73Q86Y46 540 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 TUSC5Q8IXB3 177 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 DHRSXQ8N5I4 330 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF614Q8N883 585 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 OR5AK3PQ8NH89 298 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 GPR119Q8TDV5 335 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 HSD17B8Q92506 261 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 TRMT61AQ96FX7 289 aaKnown RBP12.04□□□□□ -0.48
SMAD3-214ENST00000560402 TPD52L3Q96J77 140 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 HSH2DQ96JZ2 352 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CNBD2Q96M20 576 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 OR7D2Q96RA2 312 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 SPATA5L1Q9BVQ7 753 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CACYBPQ9HB71 228 aaKnown RBP12.04□□□□□ -0.48
SMAD3-214ENST00000560402 A4GALTQ9NPC4 353 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 P2RX2Q9UBL9 471 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CSPG4Q6UVK1 2322 aa12.04□□□□□ -0.48
SMAD3-214ENST00000560402 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
SMAD3-214ENST00000560402 NPIPA5A0A0B4J1W7 369 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 NPIPA7E9PJI5 369 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 EI24O14681 340 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 MT-ND1P03886 318 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 NPIPA8P0DM63 369 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 PCSK6P29122 969 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 MAGEA2P43356 314 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 CCR4P51679 360 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 RAD23AP54725 363 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ITGADQ13349 1161 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 GK3PQ14409 553 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 TAB1Q15750 504 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ADRM1Q16186 407 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 TMEM176BQ3YBM2 270 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-214ENST00000560402 IFI44LQ53G44 452 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 C6orf52Q5T4I8 152 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 OR2T5Q6IEZ7 315 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 Q6ZT83 130 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 C6orf120Q7Z4R8 191 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF555Q8NEP9 628 aa12.03□□□□□ -0.48
SMAD3-214ENST00000560402 OR2T29Q8NH02 315 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms