RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 B3GLCTQ6Y288 498 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 SERPINA11Q86U17 422 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 CLIP4Q8N3C7 705 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 ZIC4Q8N9L1 334 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 OR9I1Q8NGQ6 314 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 MFSD8Q8NHS3 518 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 GTF2H4Q92759 462 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 C3orf49Q96BT1 292 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 SPATA5L1Q9BVQ7 753 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 C1QTNF6Q9BXI9 259 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 C12orf10Q9HB07 376 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 PCDHB14Q9Y5E9 798 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 USH1CQ9Y6N9 552 aa10.74□□□□□ -0.69
SPG11-219ENST00000559822 CHD3Q12873 2000 aaKnown RBP10.74□□□□□ -0.69
SPG11-219ENST00000559822 ELOA3DA6NLF2 546 aaPredicted RBP10.73□□□□□ -0.69
SPG11-219ENST00000559822 TMEM229AB2RXF0 380 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 OR2T1O43869 369 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 NPIPB7O75200 414 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 IFNA2P01563 188 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 PRG2P13727 222 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 CDH2P19022 906 aaPredicted RBP10.73□□□□□ -0.69
SPG11-219ENST00000559822 PTNP21246 168 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 ELOA3BQ3SY89 546 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 HMBOX1Q6NT76 420 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 EPGNQ6UW88 154 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 CREB3L2Q70SY1 520 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 MAVSQ7Z434 540 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 KRT73Q86Y46 540 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 ELOA3Q8NG57 546 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 OR10H5Q8NGA6 315 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 C7orf26Q96N11 449 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 PAIP1Q9H074 479 aaKnown RBP10.73□□□□□ -0.69
SPG11-219ENST00000559822 TCF7L2Q9NQB0 619 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 YAE1D1Q9NRH1 226 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 CORO2BQ9UQ03 480 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 RCE1Q9Y256 329 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 CR1P17927 2039 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 ABCA1O95477 2261 aa10.73□□□□□ -0.69
SPG11-219ENST00000559822 HEATR1Q9H583 2144 aaKnown RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 SONP18583 2426 aaKnown RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 IGHV4-30-2A0A087WSY4 118 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 A8MV72 311 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 ATP6V1G2-DDX39BF2Z307 99 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 AKAP8O43823 692 aaKnown RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 CRYAAP02489 173 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 PNMTP11086 282 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 ZNF43P17038 809 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 PRKAR1BP31321 381 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SELENOPP49908 381 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 P2RY4P51582 365 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 EFNA4P52798 201 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 NCALDP61601 193 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SLC25A3Q00325 362 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 LOXL1Q08397 574 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 C3orf36Q3SXR2 165 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 TBRG1Q3YBR2 411 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 HIKESHIQ53FT3 197 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 LRIF1Q5T3J3 769 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 GCNT6Q5T4J0 391 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 AGBL2Q5U5Z8 902 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 NIPAL3Q6P499 406 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SLC2A7Q6PXP3 512 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 C6orf89Q6UWU4 347 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 ANKK1Q8NFD2 765 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 BHLHE22Q8NFJ8 381 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 OR1K1Q8NGR3 316 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 MAGEE2Q8TD90 523 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 LRRC8CQ8TDW0 803 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 DNAJA4Q8WW22 397 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 FAM168AQ92567 244 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 PROX1Q92786 737 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SLC38A4Q969I6 547 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SLC25A36Q96CQ1 311 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 ALKBH3Q96Q83 286 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 SLC38A2Q96QD8 506 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 KATNB1Q9BVA0 655 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 LINC00470Q9BZP3 86 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 SELENONQ9NZV5 590 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 FBXO9Q9UK97 447 aaPredicted RBP10.72□□□□□ -0.69
SPG11-219ENST00000559822 MOKQ9UQ07 419 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 CHST2Q9Y4C5 530 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 FKBP7Q9Y680 259 aa10.72□□□□□ -0.69
SPG11-219ENST00000559822 ARPC4-TTLL3A0A0A6YYG9 625 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 PRORSD1PA6NEY8 169 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 FTCDNL1E5RQL4 147 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 NR5A2O00482 541 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 AIM2O14862 343 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 SLC43A1O75387 559 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 PDE5AO76074 875 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 LGI1O95970 557 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 NUDT7P0C024 238 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 ARAFP10398 606 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 RPS5P46782 204 aaKnown RBP10.71□□□□□ -0.69
SPG11-219ENST00000559822 SNRPD2P62316 118 aaKnown RBP10.71□□□□□ -0.69
SPG11-219ENST00000559822 C1DQ13901 141 aaKnown RBP10.71□□□□□ -0.69
SPG11-219ENST00000559822 MFSD13AQ14CX5 517 aa10.71□□□□□ -0.69
SPG11-219ENST00000559822 BEND6Q5SZJ8 279 aaPredicted RBP10.71□□□□□ -0.69
SPG11-219ENST00000559822 FAM69AQ5T7M9 428 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms