RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 YEATS4O95619 227 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 IGHG1P01857 330 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 CLTAP09496 248 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 MYL2P10916 166 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 RNH1P13489 461 aaKnown RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 HSD17B1P14061 328 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SELEP16581 610 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SERPINA2P20848 420 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 IGFBP5P24593 272 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 VHLP40337 213 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 XCR1P46094 333 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 DAP3P51398 398 aaKnown RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 HSPA2P54652 639 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 XIAPP98170 497 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 IRF8Q02556 426 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ZNF33BQ06732 778 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ZNF154Q13106 437 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ZNF829Q3KNS6 432 aaPredicted RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 HSDL1Q3SXM5 330 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 XKR4Q5GH76 650 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 MUC21Q5SSG8 566 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 LGSNQ5TDP6 509 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 C9orf135Q5VTT2 229 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OLFML2AQ68BL7 652 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 REP15Q6BDI9 236 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 C22orf42Q6IC83 251 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SLC25A25Q6KCM7 469 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 H3F3CQ6NXT2 135 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 DEGS2Q6QHC5 323 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 PRSS48Q7RTY5 328 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ERICH1Q86X53 443 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 CCDC65Q8IXS2 484 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SYCE1Q8N0S2 351 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OR2L13Q8N349 312 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ASCC1Q8N9N2 400 aaKnown RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 PROKR2Q8NFJ6 384 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 B3GNT7Q8NFL0 401 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 BEST4Q8NFU0 473 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OR4A4PQ8NGN8 299 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OR9G4Q8NGQ1 327 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 OR9A4Q8NGU2 314 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SUN5Q8TC36 379 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 PIBF1Q8WXW3 757 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 FAF2Q96CS3 445 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 SLC7A5P2Q9GIP4 190 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 NAT10Q9H0A0 1025 aaKnown RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 ADNPQ9H2P0 1102 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 GAL3ST2Q9H3Q3 398 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ZNF385DQ9H6B1 395 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 RANBP3Q9H6Z4 567 aaPredicted RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 SP140LQ9H930 580 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 MEPEQ9NQ76 525 aaPredicted RBP2.85□□□□□ -1.95
SPG11-218ENST00000559754 PXMP2Q9NR77 195 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 GPATCH2LQ9NWQ4 482 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 PHF11Q9UIL8 331 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 ERVW-1Q9UQF0 538 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 PDE10AQ9Y233 779 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 USP6P35125 1406 aa2.85□□□□□ -1.95
SPG11-218ENST00000559754 IQANK1A0A1B0GTG1 560 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 GSTTP1A0A1W2PQM5 241 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 IDSB3KWA1 339 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TRDCB7Z8K6 153 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 E7ESA3 106 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 CHST1O43916 411 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 HUS1O60921 280 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 FGFR1OPO95684 399 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 ALDOBP05062 364 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 LGALS2P05162 132 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SERPINE2P07093 398 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 WNT2P09544 360 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ZNF853P0CG23 659 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 RORAP35398 523 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ELK3P41970 407 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MAGEA9P43362 315 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MRPL19P49406 292 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 HMGCS2P54868 508 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MFAP2P55001 183 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 YWHAEP62258 255 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 RAD51Q06609 339 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SCRN3Q0VDG4 424 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ST3GAL3Q11203 375 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 DPYSL3Q14195 570 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 GRB7Q14451 532 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 GNMTQ14749 295 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 DUSP7Q16829 419 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 DGUOKQ16854 277 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TRIM16LQ309B1 348 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MS4A13Q5J8X5 152 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ACER2Q5QJU3 275 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SEL1L2Q5TEA6 688 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 STUMQ69YW2 141 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 PDPK2PQ6A1A2 396 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 HSDL2Q6YN16 418 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 CERS6Q6ZMG9 384 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SLC25A48Q6ZT89 311 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 SLC16A14Q7RTX9 510 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TIPARPQ7Z3E1 657 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 NUDCD3Q8IVD9 361 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms