RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TIMM23BQ5SRD1 257 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 C1QTNF12Q5T7M4 302 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CGB2Q6NT52 195 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TTC33Q6PID6 262 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 KLHL17Q6TDP4 642 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 KLHL24Q6TFL4 600 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TMEM108Q6UXF1 575 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PAMR1Q6UXH9 720 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 C20orf204Q6ZNR8 217 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 FKBP9P1Q75LS8 142 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 H1FNTQ75WM6 255 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 CCDC80Q76M96 950 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 HIST3H2AQ7L7L0 130 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 AAED1Q7RTV5 226 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PTOV1Q86YD1 416 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 WFDC8Q8IUA0 241 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DEPDC4Q8N2C3 294 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 C10orf111Q8N326 155 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 C17orf78Q8N4C9 275 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TMEM99Q8N816 258 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OR9K2Q8NGE7 335 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 OR6T1Q8NGN1 323 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 VANGL1Q8TAA9 524 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 ADAMTS16Q8TE57 1224 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 HIST1H2ACQ93077 130 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TMEM45BQ96B21 275 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 RCN3Q96D15 328 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 KTI12Q96EK9 354 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 PLPPR2Q96GM1 343 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TPD52L3Q96J77 140 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MPP4Q96JB8 637 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 RADILQ96JH8 1075 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 DOCK7Q96N67 2140 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ALPK1Q96QP1 1244 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MCHR1Q99705 422 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 FOXC2Q99958 501 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 TMEM43Q9BTV4 400 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 POLR2J2Q9GZM3 115 aaKnown RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 POLR2J3Q9H1A7 115 aaKnown RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 ALG2Q9H553 416 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CXorf56Q9H5V9 222 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PLEKHF2Q9H8W4 249 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MOV10Q9HCE1 1003 aaKnown RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 SPAG4Q9NPE6 437 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CCM2LQ9NUG4 571 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 FAIMQ9NVQ4 179 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 NDE1Q9NXR1 346 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MALT1Q9UDY8 824 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PRSS50Q9UI38 385 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ST6GALNAC2Q9UJ37 374 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ING1Q9UK53 422 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 SLC7A7Q9UM01 511 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 PLEKHA6Q9Y2H5 1048 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 CHST2Q9Y4C5 530 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MAGED1Q9Y5V3 778 aaPredicted RBP3.87□□□□□ -1.79
SNX1-205ENST00000559339 FLVCR1Q9Y5Y0 555 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 ARHGAP21Q5T5U3 1957 aa3.87□□□□□ -1.79
SNX1-205ENST00000559339 MPDZO75970 2070 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 POLQO75417 2590 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 DCHS2Q6V1P9 2916 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 ABCA4P78363 2273 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 LOC102725191A0A1B0GVB3 256 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.86□□□□□ -1.79
SNX1-205ENST00000559339 TRAPPC13A5PLN9 417 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 HTR3EA5X5Y0 456 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 CPSF4LA6NMK7 179 aaKnown RBP3.86□□□□□ -1.79
SNX1-205ENST00000559339 ZNF726A6NNF4 738 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 DEFB108AA8MXU0 73 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 FAM220BPB1ANY3 271 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 ZNF587BE7ETH6 402 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 M0R082 166 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 M0R3H8 397 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 FXYD1O00168 92 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 CLOCKO15516 846 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 ARHGEF9O43307 516 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 RAMP1O60894 148 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 SMPD2O60906 423 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 TMCC2O75069 709 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 ENTPD5O75356 428 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 SLC43A1O75387 559 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 WNT11O96014 354 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 CD3EP07766 207 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 THRBP10828 461 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 UMPSP11172 480 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 BMP4P12644 408 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 CDH2P19022 906 aaPredicted RBP3.86□□□□□ -1.79
SNX1-205ENST00000559339 KLK2P20151 261 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 COX5AP20674 150 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 IGHV1-2P23083 117 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 AHCYP23526 432 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 PRDX6P30041 224 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 KDELR2P33947 212 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 SLC7A2P52569 658 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 CDH12P55289 794 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 TAS2R41P59536 307 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 PRPS1P60891 318 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 UBE2NP61088 152 aaKnown RBP3.86□□□□□ -1.79
SNX1-205ENST00000559339 SELENOWP63302 87 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 EGR4Q05215 589 aa3.86□□□□□ -1.79
SNX1-205ENST00000559339 PUDPQ08623 228 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms