RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
SNRPA1-207ENST00000559309 MED12LQ86YW9 2145 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 NCOA6Q14686 2063 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 A0A1W2PNV4 684 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 FIGNL2A6NMB9 653 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 E9PLN8 166 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 H0Y3Z8 333 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 PRRG2O14669 202 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 RAMP1O60894 148 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 AQP8O94778 261 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TPOP07202 933 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TFPIP10646 304 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 IFI30P13284 250 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF26P17031 533 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 PTNP21246 168 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 ENPP1P22413 925 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TIMP3P35625 211 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SLC9A3P48764 834 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SRYQ05066 204 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 MRPL49Q13405 166 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SF3B4Q15427 424 aaKnown RBP eCLIP13.22□□□□□ -0.292e-9■■■■■ 35.9
SNRPA1-207ENST00000559309 OR7A5Q15622 319 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SGCBQ16585 318 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 MS4A18Q3C1V0 323 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 C1orf185Q5T7R7 199 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 LRRC17Q8N6Y2 441 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TMEM99Q8N816 258 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 OR9Q2Q8NGE9 314 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 OR5K1Q8NHB7 308 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 FNDC9Q8TBE3 224 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 BCO1Q9HAY6 547 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TIGARQ9NQ88 270 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TAS2R5Q9NYW4 299 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 SIGLEC7Q9Y286 467 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 U3KQV3 271 aa13.22□□□□□ -0.29
SNRPA1-207ENST00000559309 M0R082 166 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 KPNA4O00629 521 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 PLPP3O14495 311 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 CCNB2O95067 398 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 VAMP5O95183 116 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 CH25HO95992 272 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 GASTP01350 101 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 FUT1P19526 365 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 PPP2R2BQ00005 443 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 TSPAN31Q12999 210 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 SLC17A1Q14916 467 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 PON3Q15166 354 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 IGFBP7Q16270 282 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 H1FNTQ75WM6 255 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 MAMDC2Q7Z304 686 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 HS3ST5Q8IZT8 346 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 SVOPLQ8N434 492 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 OR10G2Q8NGC3 310 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 OR5J2Q8NH18 312 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF417Q8TAU3 575 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 PIGXQ8TBF5 258 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 GIPC3Q8TF64 312 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 FAM46AQ96IP4 442 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF587Q96SQ5 575 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 TTYH2Q9BSA4 534 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 SF3B5Q9BWJ5 86 aaKnown RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 OSBPL10Q9BXB5 764 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 DCLRE1BQ9H816 532 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 CHST11Q9NPF2 352 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 NANSQ9NR45 359 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 C6orf203Q9P0P8 240 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 MGAT4BQ9UQ53 548 aa13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 MAGED1Q9Y5V3 778 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-207ENST00000559309 USP9YO00507 2555 aaPredicted RBP13.21□□□□□ -0.3
SNRPA1-207ENST00000559309 NPIPB13A6NJU9 1138 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 SLC22A20A6NK97 555 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 NPIPB4C9JG80 1138 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 E9PQ18 207 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 OR10H3O60404 316 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 AKR7A3O95154 331 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 RCBTB2O95199 551 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 HPRP00739 348 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ADAP00813 363 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 GLI4P10075 376 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ANPEPP15144 967 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 OR2B6P58173 313 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 ZNF585AQ6P3V2 769 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 PLXDC2Q6UX71 529 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 RPTNQ6XPR3 784 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 B3GNT6Q6ZMB0 384 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
SNRPA1-207ENST00000559309 HIPK1Q86Z02 1210 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms