RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 MSANTD1Q6ZTZ1 278 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 ZNF440Q8IYI8 595 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 C1orf162Q8NEQ5 155 aaPredicted RBP11.82□□□□□ -0.52
VPS18-203ENST00000558855 OR1K1Q8NGR3 316 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 NFKBIDQ8NI38 313 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 BCL2L2Q92843 193 aaPredicted RBP11.82□□□□□ -0.52
VPS18-203ENST00000558855 A4GALTQ9NPC4 353 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 YAE1D1Q9NRH1 226 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 VAPAQ9P0L0 249 aa11.82□□□□□ -0.52
VPS18-203ENST00000558855 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 HNRNPCL2B2RXH8 293 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 SLCO1B7G3V0H7 640 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 CLIC1O00299 241 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 TPST2O60704 377 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 HNRNPCL1O60812 293 aaKnown RBP11.81□□□□□ -0.52
VPS18-203ENST00000558855 FZD7O75084 574 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 CELA3BP08861 270 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 ARAFP10398 606 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 RPS5P46782 204 aaKnown RBP11.81□□□□□ -0.52
VPS18-203ENST00000558855 IDH3AP50213 366 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 GNA13Q14344 377 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 TTMPQ5BVD1 217 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 ZNF311Q5JNZ3 666 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 PHYHD1Q5SRE7 291 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 NIPAL3Q6P499 406 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 KLHL17Q6TDP4 642 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 MIER2Q8N344 545 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 SLC25A36Q96CQ1 311 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 BOD1Q96IK1 185 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 SORCS2Q96PQ0 1159 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
VPS18-203ENST00000558855 BCL2L10Q9HD36 194 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 NKIRAS1Q9NYS0 192 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 MGAT4BQ9UQ53 548 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 AMDHD2Q9Y303 409 aa11.81□□□□□ -0.52
VPS18-203ENST00000558855 COL6A5A8TX70 2615 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 ATRQ13535 2644 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 A0A096LPE4 126 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 A0A096LPI6 279 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 A0A1B0GWA3 101 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 A0A1W2PPZ6 126 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 H7C417 338 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 SEC14L2O76054 403 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 ZNF432O94892 652 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 HPRP00739 348 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 NCF2P19878 526 aaPredicted RBP11.8□□□□□ -0.52
VPS18-203ENST00000558855 CBLP22681 906 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 CALCRP30988 508 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 MRPL19P49406 292 aaKnown RBP11.8□□□□□ -0.52
VPS18-203ENST00000558855 LARS2Q15031 903 aaKnown RBP11.8□□□□□ -0.52
VPS18-203ENST00000558855 NRF1Q16656 503 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 SWI5Q1ZZU3 235 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 TMEM249Q2WGJ8 235 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 LRIF1Q5T3J3 769 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 PRAMEF8Q5VWM4 474 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 PRAMEF7Q5VXH5 474 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 BLOC1S3Q6QNY0 202 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 CROCCP2Q86T23 111 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 FBXL14Q8N1E6 418 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 TAAR8Q969N4 342 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 RMND5AQ9H871 391 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 BARX1Q9HBU1 254 aaPredicted RBP11.8□□□□□ -0.52
VPS18-203ENST00000558855 FAIMQ9NVQ4 179 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 PARPBPQ9NWS1 579 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 CALML5Q9NZT1 146 aa11.8□□□□□ -0.52
VPS18-203ENST00000558855 ELOA3DA6NLF2 546 aaPredicted RBP11.79□□□□□ -0.52
VPS18-203ENST00000558855 LRRN3E7EW58 273 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 M0R082 166 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 TRAF3IP2O43734 574 aaPredicted RBP11.79□□□□□ -0.52
VPS18-203ENST00000558855 IGFBP1P08833 259 aaPredicted RBP11.79□□□□□ -0.52
VPS18-203ENST00000558855 CECR9P0C854 216 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 HLA-DOBP13765 273 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 UQCRBP14927 111 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 MAP2K6P52564 334 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 CLDN17P56750 224 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 SELPLGQ14242 412 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ADRM1Q16186 407 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ELOA3BQ3SY89 546 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 C6orf52Q5T4I8 152 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 TMEM225Q6GV28 225 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ZNF544Q6NX49 715 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 C6orf89Q6UWU4 347 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 CXXC5Q7LFL8 322 aaKnown RBP11.79□□□□□ -0.52
VPS18-203ENST00000558855 ANKS4BQ8N8V4 417 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 POMGNT2Q8NAT1 580 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ELOA3Q8NG57 546 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 MFSD8Q8NHS3 518 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 BBS10Q8TAM1 723 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ZNF417Q8TAU3 575 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 STK35Q8TDR2 534 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 C7orf26Q96N11 449 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
VPS18-203ENST00000558855 RHNO1Q9BSD3 238 aa11.79□□□□□ -0.52
VPS18-203ENST00000558855 TAPBPLQ9BX59 468 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms