RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 HIKESHIQ53FT3 197 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 NIPAL3Q6P499 406 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 KLHL24Q6TFL4 600 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 CREB3L2Q70SY1 520 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 DHDDSQ86SQ9 333 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 WDR31Q8NA23 367 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 C1orf162Q8NEQ5 155 aaPredicted RBP10.46□□□□□ -0.73
HERC1-202ENST00000558324 STK35Q8TDR2 534 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 TRAF4Q9BUZ4 470 aaPredicted RBP10.46□□□□□ -0.73
HERC1-202ENST00000558324 PTDSS2Q9BVG9 487 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 SPATA5L1Q9BVQ7 753 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 RABEP2Q9H5N1 569 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 VIPAS39Q9H9C1 493 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 FAIMQ9NVQ4 179 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 LEF1Q9UJU2 399 aaPredicted RBP10.46□□□□□ -0.73
HERC1-202ENST00000558324 SLC13A4Q9UKG4 626 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 CORO2BQ9UQ03 480 aa10.46□□□□□ -0.73
HERC1-202ENST00000558324 FTCDNL1E5RQL4 147 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 E7EQL1 145 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 OVOL3O00110 214 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 EDF1O60869 148 aaKnown RBP10.45□□□□□ -0.74
HERC1-202ENST00000558324 SASH3O75995 380 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 LGI1O95970 557 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 CD8AP01732 235 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 OPN1SWP03999 348 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 GPX2P18283 190 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 PCSK6P29122 969 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 RGS8P57771 180 aaPredicted RBP10.45□□□□□ -0.74
HERC1-202ENST00000558324 TNK1Q13470 666 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 SELPLGQ14242 412 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 ALG10BQ5I7T1 473 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 DHRS4L2Q6PKH6 230 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 DLEU7Q6UYE1 221 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 ARMC8Q8IUR7 673 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 EPHX4Q8IUS5 362 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 C17orf78Q8N4C9 275 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 POMGNT2Q8NAT1 580 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 SMYD1Q8NB12 490 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 MFSD8Q8NHS3 518 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 SLC35B4Q969S0 331 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 RADILQ96JH8 1075 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 HS6ST2Q96MM7 605 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 AMBRA1Q9C0C7 1298 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 TMEM38AQ9H6F2 299 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 SLC17A5Q9NRA2 495 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 TMEM45AQ9NWC5 275 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 GDF2Q9UK05 429 aaPredicted RBP10.45□□□□□ -0.74
HERC1-202ENST00000558324 TRIM33Q9UPN9 1127 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 MGAT4BQ9UQ53 548 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 ANGPT4Q9Y264 503 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 RASD1Q9Y272 281 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 NDUFAF1Q9Y375 327 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 ROS1P08922 2347 aa10.45□□□□□ -0.74
HERC1-202ENST00000558324 IGKV1D-42A0A075B6H8 117 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 PRORSD1PA6NEY8 169 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 RNF223E7ERA6 249 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ZNF587BE7ETH6 402 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 M0R082 166 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 SERPINB7O75635 380 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 VAMP5O95183 116 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 IGHV4-39P01824 125 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ACVR1BP36896 505 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 CLDN17P56750 224 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 PRPS1P60891 318 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
HERC1-202ENST00000558324 DMTNQ08495 405 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 SF3A3Q12874 501 aaKnown RBP eCLIP10.44□□□□□ -0.74
HERC1-202ENST00000558324 NFYCQ13952 458 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ADRM1Q16186 407 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 RUNDC3AQ59EK9 446 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 AGAP6Q5VW22 663 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 C6orf89Q6UWU4 347 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 LINGO2Q7L985 606 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ABHD12BQ7Z5M8 362 aaPredicted RBP10.44□□□□□ -0.74
HERC1-202ENST00000558324 RETREG3Q86VR2 466 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 DEPDC4Q8N2C3 294 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 HIPK4Q8NE63 616 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ZNF417Q8TAU3 575 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 HTRA1Q92743 480 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 SLC38A4Q969I6 547 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 TAAR8Q969N4 342 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ZNF607Q96SK3 696 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ZNF587Q96SQ5 575 aaPredicted RBP10.44□□□□□ -0.74
HERC1-202ENST00000558324 WFDC6Q9BQY6 131 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 CACNG6Q9BXT2 260 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ZNF385DQ9H6B1 395 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 SELENONQ9NZV5 590 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 TESQ9UGI8 421 aaKnown RBP10.44□□□□□ -0.74
HERC1-202ENST00000558324 PRDM4Q9UKN5 801 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 ATP23Q9Y6H3 246 aa10.44□□□□□ -0.74
HERC1-202ENST00000558324 TRAV36DV7A0A075B6V5 113 aa10.43□□□□□ -0.74
HERC1-202ENST00000558324 A0A096LPE4 126 aa10.43□□□□□ -0.74
HERC1-202ENST00000558324 A0A1W2PPZ6 126 aa10.43□□□□□ -0.74
HERC1-202ENST00000558324 ATP6V1G2-DDX39BF2Z307 99 aa10.43□□□□□ -0.74
HERC1-202ENST00000558324 M0R3H8 397 aa10.43□□□□□ -0.74
HERC1-202ENST00000558324 UPK3AO75631 287 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms