RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 OR2D3Q8NGH3 330 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PSMF1Q92530 271 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SLC25A18Q9H1K4 315 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 STEAP1Q9UHE8 339 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 CSNK1A1P48729 337 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CAMKVQ8NCB2 501 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR51D1Q8NGF3 324 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PHYHIPQ92561 330 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 DLL4Q9NR61 685 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KCNS2Q9ULS6 477 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FANCD2Q9BXW9 1451 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 IGKV6D-41A0A0C4DH26 115 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RBFOX3A6NFN3 312 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HIDE1A8MVS5 230 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GFYI3L273 518 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CD82P27701 267 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 XAF1Q6GPH4 301 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NUP54Q7Z3B4 507 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KDF1Q8NAX2 398 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF331Q9NQX6 463 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MMP24Q9Y5R2 645 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 A0A087WV62 115 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 C17orf113A0A1B0GUU1 675 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MED19A0JLT2 244 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 H7BYZ3 331 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GPR32O75388 356 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ANKRD34CP0C6C1 535 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ADRA1AP35348 466 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SGCBQ16585 318 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PABPC1L2AQ5JQF8 200 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 B3GNT9Q6UX72 402 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GDPD4Q6W3E5 623 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR2T4Q8NH00 348 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HOXB13Q92826 284 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 DOCK7Q96N67 2140 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PGAP2Q9UHJ9 254 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TUBAL3A6NHL2 446 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFS8O00217 210 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 IGHA1P01876 353 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CEBPBP17676 345 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CCNOP22674 350 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 P2RX1P51575 399 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM209BQ5JX69 171 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TRIB3Q96RU7 358 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PARD6GQ9BYG4 376 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 LINC00597Q9H2U6 94 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SERTAD3Q9UJW9 196 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CACNA1GO43497 2377 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM74A7A6NL05 159 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 EIF4EP06730 217 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35G4P0C7Q5 338 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PI3P19957 117 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SERPINA2P20848 420 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF273Q14593 569 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 UBE2V2Q15819 145 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM109BQ6ICB4 259 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MKXQ8IYA7 352 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SECTM1Q8WVN6 248 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM3CQ92520 227 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SH3BGRL2Q9UJC5 107 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF407Q9C0G0 2248 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 LINC00587B1AMM8 73 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ATP1B1P05026 303 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NECAP1Q8NC96 275 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 FAM124BQ9H5Z6 455 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HMX1Q9NP08 348 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 GHRLQ9UBU3 117 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SEC14L5O43304 696 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KCNAB3O43448 404 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR2T1O43869 369 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 EIF3GO75821 320 aaKnown RBP eCLIP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ACAA1P09110 424 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 VIPR2P41587 438 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HTR6P50406 440 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 PIP5KL1Q5T9C9 394 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 HBMQ6B0K9 141 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM156Q8N614 296 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 KIAA1143Q96AT1 154 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MRPL38Q96DV4 380 aaKnown RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 MIXL1Q9H2W2 232 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TRBV23-1A0A0A0MS06 115 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM88BA6NKF7 163 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SOX15O60248 233 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CPEP16870 476 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ARRB2P32121 409 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CCKBRP32239 447 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 RBP2P50120 134 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CCL23P55773 120 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR10A3P58181 314 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 NKAIN1Q4KMZ8 207 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR6N2Q8NGY6 317 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 OR14C36Q8NHC7 312 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF689Q96CS4 500 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-248ENST00000558190 CLCF1Q9UBD9 225 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 SNAPC4Q5SXM2 1469 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF816-ZNF321PA0A0X1KG74 233 aa3.43□□□□□ -1.86
ATXN3-248ENST00000558190 DRGXA6NNA5 263 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms