RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TAS2R16Q9NYV7 291 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF443Q9Y2A4 671 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC9A8Q9Y2E8 581 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 EXPH5Q8NEV8 1989 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 C2CD3Q4AC94 2353 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 DOCK7Q96N67 2140 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ARHGAP21Q5T5U3 1957 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 A0A1W2PP18 115 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 A0A1W2PPR1 153 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MEGF11A6BM72 1044 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF814B7Z6K7 855 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 AP3D1O14617 1153 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 HS3ST1O14792 307 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ANGPT2O15123 496 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BCAS1O75363 584 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PGM3O95394 542 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 IGHV3-9P01782 118 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SNRPBP14678 240 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ETS2P15036 469 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MRPL19P49406 292 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MVDP53602 400 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC16A1P53985 500 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 H3F3AP84243 136 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 FAPQ12884 760 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 CEACAM7Q14002 265 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SQLEQ14534 574 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 TSC22D1Q15714 1073 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 Q5PR19 223 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 OTUD3Q5T2D3 398 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 REEP3Q6NUK4 255 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 TMEM108Q6UXF1 575 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 CASP12Q6UXS9 341 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BIVMQ86UB2 503 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF611Q8N823 705 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 WFDC11Q8NEX6 87 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 AKAP1Q92667 903 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 FBXW5Q969U6 566 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 DNAJA3Q96EY1 480 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PERPQ96FX8 193 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF300Q96RE9 604 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ARPC5LQ9BPX5 153 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SF3B5Q9BWJ5 86 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PAIP1Q9H074 479 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BCL2L10Q9HD36 194 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 A4GALTQ9NPC4 353 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC6A13Q9NSD5 602 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ADPRHL2Q9NX46 363 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 POU2F3Q9UKI9 436 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MGAT4BQ9UQ53 548 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 LAMP3Q9UQV4 416 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 NDUFAF1Q9Y375 327 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 DSPPQ9NZW4 1301 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 TMEM72A0PK05 275 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 OR6C65A6NJZ3 312 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 OR5H1A6NKK0 313 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 VSTM5A8MXK1 200 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 OR2T1O43869 369 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 AHSA1O95433 338 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 C1QCP02747 245 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 INHBBP09529 407 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ECI1P42126 302 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ATP4BP51164 291 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 CDK6Q00534 326 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 GUCY1A3Q02108 690 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 OR7A5Q15622 319 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 GTDC1Q4AE62 458 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 TTMPQ5BVD1 217 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 GCNT6Q5T4J0 391 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ABLIM2Q6H8Q1 611 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ADAM5Q6NVV9 412 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 KLHL24Q6TFL4 600 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 C5orf46Q6UWT4 87 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF836Q6ZNA1 936 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 FKBP9P1Q75LS8 142 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 POMGNT2Q8NAT1 580 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 SMAP2Q8WU79 429 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-222ENST00000556768 DNAJA4Q8WW22 397 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-222ENST00000556768 CKAP2Q8WWK9 683 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 MAL2Q969L2 176 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 EBF4Q9BQW3 602 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 PRSS50Q9UI38 385 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 ING1Q9UK53 422 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-222ENST00000556768 MAGED1Q9Y5V3 778 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-222ENST00000556768 KIAA1549Q9HCM3 1950 aa6.47□□□□□ -1.37
SCFD1-222ENST00000556768 FLNAP21333 2647 aaKnown RBP6.46□□□□□ -1.37
SCFD1-222ENST00000556768 A0A0G2JND7 137 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 LIPT2A6NK58 231 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF716A6NP11 495 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 RAD51DO75771 328 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 AKR7A3O95154 331 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 PNMTP11086 282 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 NAT1P18440 290 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 COX5AP20674 150 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 IGHV1-2P23083 117 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 PAX7P23759 505 aa6.46□□□□□ -1.37
SCFD1-222ENST00000556768 PTAFRP25105 342 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms