RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 PRSS27Q9BQR3 290 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 TMEM43Q9BTV4 400 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ZNF426Q9BUY5 554 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 RBM24Q9BX46 236 aaKnown RBP8.57□□□□□ -1.04
SRP54-210ENST00000556380 GORASP2Q9H8Y8 452 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 GALNT8Q9NY28 637 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 ADA2Q9NZK5 511 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 KLHL9Q9P2J3 617 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 RPS6KB2Q9UBS0 482 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 PROCRQ9UNN8 238 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 SLC9A8Q9Y2E8 581 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 SH3GLB1Q9Y371 365 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 CCDC168Q8NDH2 2452 aa8.57□□□□□ -1.04
SRP54-210ENST00000556380 AKAP6Q13023 2319 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 TRAPPC13A5PLN9 417 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 AQP7P3A6NL99 342 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 CPSF4LA6NMK7 179 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 CHP2O43745 196 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 SMNDC1O75940 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
SRP54-210ENST00000556380 AKR7A3O95154 331 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 PLGP00747 810 aaPredicted RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 NCK1P16333 377 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 FUT4P22083 530 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 UQCRC1P31930 480 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 NCALDP61601 193 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 SNTB1Q13884 538 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 SLC17A1Q14916 467 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 OR7A5Q15622 319 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 SPATS1Q496A3 300 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 SAMD4BQ5PRF9 694 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 GLYATQ6IB77 296 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 TFAP2EQ6VUC0 442 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 NHLRC1Q6VVB1 395 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 RINLQ6ZS11 566 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 TRPM8Q7Z2W7 1104 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 GDF7Q7Z4P5 450 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 VTCN1Q7Z7D3 282 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 KIF18BQ86Y91 864 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 MCEMP1Q8IX19 187 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 DEFB107AQ8IZN7 70 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 FAM156AQ8NDB6 213 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 PIGXQ8TBF5 258 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 ADAMTS16Q8TE57 1224 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 ZHX1-C8orf76Q96EF9 292 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 TACO1Q9BSH4 297 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 NAA11Q9BSU3 229 aaPredicted RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 SF3B5Q9BWJ5 86 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 AMBRA1Q9C0C7 1298 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 POLR2J2Q9GZM3 115 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 POLR2J3Q9H1A7 115 aaKnown RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 NDE1Q9NXR1 346 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 ELOVL5Q9NYP7 299 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 EGFL7Q9UHF1 273 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 SNX13Q9Y5W8 968 aa8.56□□□□□ -1.04
SRP54-210ENST00000556380 MAP1AP78559 2803 aaPredicted RBP8.56□□□□□ -1.04
SRP54-210ENST00000556380 PRR14LQ5THK1 2151 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 FFAR1O14842 300 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 GSTA4O15217 222 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 OR2T1O43869 369 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 PRSS23O95084 383 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 OR5F1O95221 314 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 AHSA1O95433 338 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 SERPINA1P01009 418 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 BGLAPP02818 100 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 CALB2P22676 271 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 CCKARP32238 428 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 MSX2P35548 267 aaPredicted RBP8.55□□□□□ -1.04
SRP54-210ENST00000556380 CD79BP40259 229 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 PEX19P40855 299 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 RPS5P46782 204 aaKnown RBP8.55□□□□□ -1.04
SRP54-210ENST00000556380 OR3A2P47893 321 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 PIN1Q13526 163 aaPredicted RBP8.55□□□□□ -1.04
SRP54-210ENST00000556380 IQCCQ4KMZ1 466 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 TMEM201Q5SNT2 666 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 OTUD3Q5T2D3 398 aaPredicted RBP8.55□□□□□ -1.04
SRP54-210ENST00000556380 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 C16orf89Q6UX73 402 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 STAC2Q6ZMT1 411 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 C22orf34Q6ZV56 151 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 GALNT5Q7Z7M9 940 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 DEPDC4Q8N2C3 294 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 OR9K2Q8NGE7 335 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 LINC01560Q8TB33 94 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 FAM222BQ8WU58 562 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 C14orf79Q96F83 325 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 LRRC46Q96FV0 321 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 SLC41A3Q96GZ6 507 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 TPD52L3Q96J77 140 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 MPP4Q96JB8 637 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 C7orf34Q96L11 122 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 DCAF13Q9NV06 445 aaKnown RBP8.55□□□□□ -1.04
SRP54-210ENST00000556380 ADPRHL2Q9NX46 363 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 TAS2R1Q9NYW7 299 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 CRIM1Q9NZV1 1036 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 B3GAT1Q9P2W7 334 aa8.55□□□□□ -1.04
SRP54-210ENST00000556380 SEC14L4Q9UDX3 406 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms