RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 ABCA1O95477 2261 aa18.9■□□□□ 0.62
SDR39U1-216ENST00000556175 CHD3Q12873 2000 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-216ENST00000556175 TMEM229AB2RXF0 380 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 CLIC1O00299 241 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 NPIPB7O75200 414 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 BMP2P12643 396 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 PRG2P13727 222 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 CDH2P19022 906 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 APOBEC3AP31941 199 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 MRPL19P49406 292 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 P2RY4P51582 365 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 EPGNQ6UW88 154 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 CREB3L2Q70SY1 520 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 MFSD8Q8NHS3 518 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 ZNF317Q96PQ6 595 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 PAIP1Q9H074 479 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 RPS6KB2Q9UBS0 482 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 ADAM21Q9UKJ8 722 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 PMF1-BGLAPU3KQ54 211 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 ATRQ13535 2644 aa18.89■□□□□ 0.61
SDR39U1-216ENST00000556175 IGHV4-30-2A0A087WSY4 118 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 POLR3GO15318 223 aaPredicted RBP18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 CSF3P09919 207 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 SLC25A16P16260 332 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 HIKESHIQ53FT3 197 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 SLC2A7Q6PXP3 512 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 C5orf46Q6UWT4 87 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 OR10H5Q8NGA6 315 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 C7orf26Q96N11 449 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 KCNS3Q9BQ31 491 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 C12orf10Q9HB07 376 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 TCF7L2Q9NQB0 619 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 YAE1D1Q9NRH1 226 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 CHST2Q9Y4C5 530 aa18.88■□□□□ 0.61
SDR39U1-216ENST00000556175 ELOA3DA6NLF2 546 aaPredicted RBP18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 ATP6V1G2-DDX39BF2Z307 99 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 TGDSO95455 350 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 NUDT7P0C024 238 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 ETS2P15036 469 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 PRKAR1BP31321 381 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 SELENOPP49908 381 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 SH3BGRP55822 239 aaPredicted RBP18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 UBE2NP61088 152 aaKnown RBP18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 ELOA3BQ3SY89 546 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 NIPAL3Q6P499 406 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 ELOA3Q8NG57 546 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 OR1K1Q8NGR3 316 aa18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 HEATR1Q9H583 2144 aaKnown RBP18.87■□□□□ 0.61
SDR39U1-216ENST00000556175 FTCDNL1E5RQL4 147 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 OR2T1O43869 369 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 PNMTP11086 282 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 PPIBP23284 216 aaKnown RBP18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 EFNA4P52798 201 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 TBRG1Q3YBR2 411 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 C6orf89Q6UWU4 347 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 LSRQ86X29 649 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 EPHX4Q8IUS5 362 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 FAM168AQ92567 244 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 MAL2Q969L2 176 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 SLC25A36Q96CQ1 311 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 ALKBH3Q96Q83 286 aaPredicted RBP18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 SLC38A2Q96QD8 506 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 MDFIQ99750 246 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 SPATA5L1Q9BVQ7 753 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 LINC00470Q9BZP3 86 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 RCE1Q9Y256 329 aa18.86■□□□□ 0.61
SDR39U1-216ENST00000556175 ANK3Q12955 4377 aaKnown RBP18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 COL6A5A8TX70 2615 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 ARPC4-TTLL3A0A0A6YYG9 625 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 A8MV72 311 aaPredicted RBP18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 LGI1O95970 557 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 ZNF43P17038 809 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 LOXL1Q08397 574 aaPredicted RBP18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 BEND6Q5SZJ8 279 aaPredicted RBP18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 LRIF1Q5T3J3 769 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 GCNT6Q5T4J0 391 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 HMBOX1Q6NT76 420 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 KRT73Q86Y46 540 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 ZNF525Q8N782 197 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 ANKK1Q8NFD2 765 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 MAGEE2Q8TD90 523 aaPredicted RBP18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 LRRC8CQ8TDW0 803 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 TNFRSF13CQ96RJ3 184 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 KATNB1Q9BVA0 655 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 CORO2BQ9UQ03 480 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 MOKQ9UQ07 419 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 FKBP7Q9Y680 259 aa18.85■□□□□ 0.61
SDR39U1-216ENST00000556175 AKAP8O43823 692 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 IFNA2P01563 188 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 CRYAAP02489 173 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 HOXB1P14653 301 aaPredicted RBP18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 HOXB9P17482 250 aaPredicted RBP18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 RPS5P46782 204 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 SNRPD2P62316 118 aaKnown RBP18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 C3orf36Q3SXR2 165 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 AGBL2Q5U5Z8 902 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 ANKRD16Q6P6B7 361 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 BLOC1S3Q6QNY0 202 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 HIPK1Q86Z02 1210 aa18.84■□□□□ 0.61
SDR39U1-216ENST00000556175 LSMEM1Q8N8F7 131 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms