RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 VPS33AQ96AX1 596 aa17.24■□□□□ 0.35
PRKCH-219ENST00000555906 ALKBH3Q96Q83 286 aaPredicted RBP17.24■□□□□ 0.35
PRKCH-219ENST00000555906 RASD1Q9Y272 281 aa17.24■□□□□ 0.35
PRKCH-219ENST00000555906 IFT52Q9Y366 437 aa17.24■□□□□ 0.35
PRKCH-219ENST00000555906 ZNF587BE7ETH6 402 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 GPRIN2O60269 458 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 PAX7P23759 505 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 POLR2JP52435 117 aaKnown RBP17.23■□□□□ 0.35
PRKCH-219ENST00000555906 EFNA4P52798 201 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 VLDLRP98155 873 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 HIKESHIQ53FT3 197 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 C6orf10Q5SRN2 563 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 PRAMEF8Q5VWM4 474 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 PRAMEF7Q5VXH5 474 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 TMEM225Q6GV28 225 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 PODNL1Q6PEZ8 512 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 CREB3L2Q70SY1 520 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 SERPINA11Q86U17 422 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 CLIP4Q8N3C7 705 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 OR9I1Q8NGQ6 314 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 OR1K1Q8NGR3 316 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 C10orf105Q8TEF2 133 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 HTRA1Q92743 480 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 ZNF317Q96PQ6 595 aaPredicted RBP17.23■□□□□ 0.35
PRKCH-219ENST00000555906 OR52B2Q96RD2 323 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 TNFRSF13CQ96RJ3 184 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 MANSC1Q9H8J5 431 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 ZNF232Q9UNY5 417 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 PMF1-BGLAPU3KQ54 211 aa17.23■□□□□ 0.35
PRKCH-219ENST00000555906 UBDO15205 165 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 ZNF500O60304 480 aaPredicted RBP17.22■□□□□ 0.35
PRKCH-219ENST00000555906 FZD7O75084 574 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 KRT33AO76009 404 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 AHSA1O95433 338 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 IFNA2P01563 188 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 CDH2P19022 906 aaPredicted RBP17.22■□□□□ 0.35
PRKCH-219ENST00000555906 SELENOPP49908 381 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 FADDQ13158 208 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 TBRG1Q3YBR2 411 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 CHRFAM7AQ494W8 412 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 HMBOX1Q6NT76 420 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 MIER2Q8N344 545 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 MFSD8Q8NHS3 518 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 BBS10Q8TAM1 723 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 RAD21L1Q9H4I0 556 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 BCL2L10Q9HD36 194 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 A4GALTQ9NPC4 353 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 TMEM45AQ9NWC5 275 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 MOKQ9UQ07 419 aa17.22■□□□□ 0.35
PRKCH-219ENST00000555906 ARPC4-TTLL3A0A0A6YYG9 625 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 IGHV1-18A0A0C4DH31 117 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 FTCDNL1E5RQL4 147 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 KLF11O14901 512 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 LGI1O95970 557 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 BMP2P12643 396 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 HOXB9P17482 250 aaPredicted RBP17.21■□□□□ 0.35
PRKCH-219ENST00000555906 SH3BGRP55822 239 aaPredicted RBP17.21■□□□□ 0.35
PRKCH-219ENST00000555906 MAGOHP61326 146 aaKnown RBP17.21■□□□□ 0.35
PRKCH-219ENST00000555906 ZNF311Q5JNZ3 666 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 C6orf89Q6UWU4 347 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 EPHX4Q8IUS5 362 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 GTF2H4Q92759 462 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 PROX1Q92786 737 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 TLCD1Q96CP7 247 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 SLC38A2Q96QD8 506 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 KATNB1Q9BVA0 655 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 PTDSS2Q9BVG9 487 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 LINC00470Q9BZP3 86 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 MOV10Q9HCE1 1003 aaKnown RBP17.21■□□□□ 0.35
PRKCH-219ENST00000555906 RCE1Q9Y256 329 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 FKBP7Q9Y680 259 aa17.21■□□□□ 0.35
PRKCH-219ENST00000555906 PNMTP11086 282 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 GTF2E2P29084 291 aaKnown RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 MRPL19P49406 292 aaKnown RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 UBE2NP61088 152 aaKnown RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 LGALS3BPQ08380 585 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 RGNQ15493 299 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 SWI5Q1ZZU3 235 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 C3orf36Q3SXR2 165 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 NIPAL3Q6P499 406 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 MAGEE2Q8TD90 523 aaPredicted RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 KCNS3Q9BQ31 491 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 PAIP1Q9H074 479 aaKnown RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 C12orf10Q9HB07 376 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 TMEM160Q9NX00 188 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 CRNNQ9UBG3 495 aaPredicted RBP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 CDC42EP3Q9UKI2 254 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 PCDHB14Q9Y5E9 798 aa17.2■□□□□ 0.34
PRKCH-219ENST00000555906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKCH-219ENST00000555906 MALRD1Q5VYJ5 2156 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 CLIC1O00299 241 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 PDE5AO76074 875 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 F12P00748 615 aaPredicted RBP17.19■□□□□ 0.34
PRKCH-219ENST00000555906 NUDT7P0C024 238 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 SNRPD2P62316 118 aaKnown RBP17.19■□□□□ 0.34
PRKCH-219ENST00000555906 EGR4Q05215 589 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 SLC2A7Q6PXP3 512 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 C5orf46Q6UWT4 87 aa17.19■□□□□ 0.34
PRKCH-219ENST00000555906 LINGO2Q7L985 606 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms