RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PWWP2BQ6NUJ5 590 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 RPL13AP3Q6NVV1 102 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SLC27A4Q6P1M0 643 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 ULK3Q6PHR2 472 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 RASSF6Q6ZTQ3 369 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 AHSA2Q719I0 299 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 PRSS48Q7RTY5 328 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 OVCH2Q7RTZ1 564 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CXorf67Q86X51 503 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NKAIN4Q8IVV8 208 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NRMQ8IXM6 262 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 PRSS58Q8IYP2 241 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 STX19Q8N4C7 294 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CLDN22Q8N7P3 220 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 OR8J1Q8NGP2 316 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 OR1N1Q8NGS0 311 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 OR13F1Q8NGS4 319 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 C9orf43Q8TAL5 461 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM239Q8WW34 195 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 APH1BQ8WW43 257 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CNOT9Q92600 299 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FCGR1BQ92637 280 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 GAL3ST4Q96RP7 486 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NUDT9Q9BW91 350 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 POLDIP3Q9BY77 421 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 VN1R1Q9GZP7 353 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF71Q9NQZ8 489 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SIDT1Q9NXL6 827 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 PTTG2Q9NZH5 202 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 CNOT2Q9NZN8 540 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 AASSQ9UDR5 926 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 C19orf25Q9UFG5 118 aaPredicted RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 WARS2Q9UGM6 360 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 PSORS1C1Q9UIG5 152 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SLC5A6Q9Y289 635 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 DTX4Q9Y2E6 619 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 NTNG1Q9Y2I2 539 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 MED31Q9Y3C7 131 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 RPL36Q9Y3U8 105 aaKnown RBP6.22□□□□□ -1.41
SLIRP-204ENST00000555890 FER1L5A0AVI2 2057 aa6.22□□□□□ -1.41
SLIRP-204ENST00000555890 SHANK1Q9Y566 2161 aa6.21□□□□□ -1.41
SLIRP-204ENST00000555890 A0A1B0GWA3 101 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 HTR3EA5X5Y0 456 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 VGLL3A8MV65 326 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 D6RAR5 112 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TMX2-CTNND1H3BSU7 103 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 NTN3O00634 580 aaPredicted RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TO15178 435 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 CHP2O43745 196 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 CNOT3O75175 753 aaKnown RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 ALOX12BO75342 701 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TUSC2O75896 110 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 RCBTB2O95199 551 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 MT-ND2P03891 347 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 HMGN1P05114 100 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 CDK1P06493 297 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 PIPP12273 146 aaPredicted RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 IFI30P13284 250 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 PRG2P13727 222 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 BMP7P18075 431 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TBXA2RP21731 343 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 DCKP27707 260 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 HTR2AP28223 471 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 IL12BP29460 328 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 RBMS1P29558 406 aaKnown RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 RBM34P42696 430 aaKnown RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 GPR4P46093 362 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 PCYT1AP49585 367 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 GPR143P51810 404 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 PNLIPRP2P54317 469 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 CDK5Q00535 292 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 MC2RQ01718 297 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 PRKCDQ05655 676 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 NNATQ16517 81 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 SNAPC1Q16533 368 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TMEM44Q2T9K0 475 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 KLHL22Q53GT1 634 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 KLHL26Q53HC5 615 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 SLC25A30Q5SVS4 291 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 GPR107Q5VW38 600 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 XAF1Q6GPH4 301 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 ESPNLQ6ZVH7 1005 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 COX15Q7KZN9 410 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 ERI1Q8IV48 349 aaKnown RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 CADM2Q8N3J6 435 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TCEANCQ8N8B7 351 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 LSMEM1Q8N8F7 131 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 C17orf47Q8NEP4 570 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 OR52L1Q8NGH7 329 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 OR5L2Q8NGL0 311 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 WDR36Q8NI36 951 aaKnown RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TMEM255BQ8WV15 326 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 DNAJA4Q8WW22 397 aaPredicted RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 GGHQ92820 318 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 MUL1Q969V5 352 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 ADIPOR1Q96A54 375 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 TP53INP1Q96A56 240 aa6.21□□□□□ -1.42
SLIRP-204ENST00000555890 EFHD2Q96C19 240 aaPredicted RBP6.21□□□□□ -1.42
SLIRP-204ENST00000555890 RAX2Q96IS3 184 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms