RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 EGR4Q05215 589 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 PUDPQ08623 228 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 IL18R1Q13478 541 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 C1DQ13901 141 aaKnown RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 SLC36A3Q495N2 470 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ALG10Q5BKT4 473 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 FAM205BPQ63HN1 556 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 GTF2IRD2BQ6EKJ0 949 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 VASNQ6EMK4 673 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 TMEM225Q6GV28 225 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 TMPPEQ6ZT21 453 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 H1FNTQ75WM6 255 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 P4HA3Q7Z4N8 544 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZER1Q7Z7L7 766 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 GTF2IRD2Q86UP8 949 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 DEPDC4Q8N2C3 294 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 EXD3Q8N9H8 876 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 OR51A7Q8NH64 312 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF417Q8TAU3 575 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 LIPHQ8WWY8 451 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 TAAR8Q969N4 342 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ARL5BQ96KC2 179 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF570Q96NI8 536 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF587Q96SQ5 575 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 IFT27Q9BW83 186 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 POLDIP3Q9BY77 421 aaKnown RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 OR52D1Q9H346 318 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 EMC3Q9P0I2 261 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 RASD1Q9Y272 281 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 HIF3AQ9Y2N7 669 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 MAGED1Q9Y5V3 778 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 DNAJC13O75165 2243 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF407Q9C0G0 2248 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 A0A1B0GVC2 190 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 A0A1W2PNV4 684 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 RIIAD1A6NNX1 92 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 H0YAE9 185 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 XKRYO14609 159 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 MPZL2O60487 215 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 PLGP00747 810 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-220ENST00000555634 BGLAPP02818 100 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 OPN1LWP04000 364 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 ASAH2BP0C7U1 165 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 GABRA1P14867 456 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 CPN1P15169 458 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF3P17036 446 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 IL11P20809 199 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 PAICSP22234 425 aaKnown RBP10.06□□□□□ -0.8
SHMT2-220ENST00000555634 PTGS2P35354 604 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 PTGER4P35408 488 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 CAPGP40121 348 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 LHX2P50458 406 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 CRISP1P54107 249 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 CLDN15P56746 228 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 RPS4XP62701 263 aaKnown RBP10.06□□□□□ -0.8
SHMT2-220ENST00000555634 NPRL3Q12980 569 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 KRT80Q6KB66 452 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 SLC46A3Q7Z3Q1 461 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 GPAT4Q86UL3 456 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 GGNQ86UU5 652 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 JAZF1Q86VZ6 243 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 CISD2Q8N5K1 135 aaKnown RBP10.06□□□□□ -0.8
SHMT2-220ENST00000555634 OR10D3Q8NH80 312 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 FAR1Q8WVX9 515 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 NRG4Q8WWG1 115 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 DNAJA3Q96EY1 480 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 MOGAT1Q96PD6 335 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 TAAR6Q96RI8 345 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
SHMT2-220ENST00000555634 ADI1Q9BV57 179 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 PTDSS2Q9BVG9 487 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 TOR3AQ9H497 397 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 INIPQ9NRY2 104 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 KLHL9Q9P2J3 617 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 GRHPRQ9UBQ7 328 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 RAB26Q9ULW5 256 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 SIGLEC7Q9Y286 467 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 GMPPBQ9Y5P6 360 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 LIPGQ9Y5X9 500 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 FAM208BQ5VWN6 2430 aa10.06□□□□□ -0.8
SHMT2-220ENST00000555634 UNC79Q9P2D8 2635 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 A0A1B0GTH9 108 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 SLC22A20A6NK97 555 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 AQP7P3A6NL99 342 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 SNTNA6NMZ2 147 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 C11orf98E9PRG8 122 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 CDC42EP2O14613 210 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 PRRG2O14669 202 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 KLF4O43474 513 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 IDH3BO43837 385 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 CXCL13O43927 109 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 WDR1O75083 606 aa10.05□□□□□ -0.8
SHMT2-220ENST00000555634 SERPINI2O75830 405 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms