RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ACVR1BP36896 505 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 KIR2DL1P43626 348 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GDI2P50395 445 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ADPRHP54922 357 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TNFRSF17Q02223 184 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 KIR2DS3Q14952 304 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TSC22D1Q15714 1073 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 STK11Q15831 433 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ZNF750Q32MQ0 723 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ZNF660Q6AZW8 331 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TMPRSS11FQ6ZWK6 438 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 CDK20Q8IZL9 346 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 POMGNT2Q8NAT1 580 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GIMAP5Q96F15 307 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 S100A16Q96FQ6 103 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TRMT61BQ9BVS5 477 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GAREM1Q9H706 876 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GPR160Q9UJ42 338 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PCOLCE2Q9UKZ9 415 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PLCL2Q9UPR0 1127 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ZNF443Q9Y2A4 671 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 KCNE3Q9Y6H6 103 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PRRC2BQ5JSZ5 2229 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TRPM6Q9BX84 2022 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 C2orf16Q68DN1 1984 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3DA0A087WVF3 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3IA0A087WXS9 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3EA0A087X179 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 A0A0D9SG52 128 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PQLC2LA1A4F0 135 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3LB9A6J9 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TEX46H3BTG2 121 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 H7C2Y5 167 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 K7EQS6 105 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 LGALS8O00214 317 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ARPC5O15511 151 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PIP5K1CO60331 668 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 FMO6PO60774 539 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 APOC3P02656 99 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 STATHP02808 62 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 OR2T7P0C7T2 308 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3HP0C7X1 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 POU3F2P20265 443 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 DPP4P27487 766 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 MPGP29372 298 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PYCR1P32322 319 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 OR12D2P58182 307 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GGTLC2Q14390 218 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 ARHGAP11BQ3KRB8 267 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 LINC00303Q3SY05 128 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 SFRP5Q5T4F7 317 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3CQ6IPX1 549 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 MFSD12Q6NUT3 480 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 OLIG3Q7RTU3 272 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TBC1D3Q8IZP1 549 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 OR4K14Q8NGD5 310 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 OR2T27Q8NH04 317 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 PHYHIPLQ96FC7 376 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 C10orf90Q96M02 699 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 GABRG3Q99928 467 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 NKX6-2Q9C056 277 aaPredicted RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 MCCC2Q9HCC0 563 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 EQTNQ9NQ60 294 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 EXOSC3Q9NQT5 275 aaKnown RBP9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 FBXL2Q9UKC9 423 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 CLEC4AQ9UMR7 237 aa9.83□□□□□ -0.84
MTHFD1-210ENST00000555252 TICRRQ7Z2Z1 1910 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 IFITM5A6NNB3 132 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 TNFSF14O43557 240 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 CDC123O75794 336 aaPredicted RBP9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 APBB3O95704 486 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 IFNGP01579 166 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 IFI6P09912 130 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 PTH2RP49190 550 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 FXYD6P3P58550 94 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 TMEM255AQ5JRV8 349 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 NUP210LQ5VU65 1888 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 SLC36A1Q7Z2H8 476 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 DGLUCYQ7Z3D6 616 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 VN1R4Q7Z5H5 301 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 OR2AK2Q8NG84 335 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 OR4E2Q8NGC2 313 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 OR5J2Q8NH18 312 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 RPS4Y2Q8TD47 263 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 HAVCR1Q96D42 359 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 TM4SF19Q96DZ7 209 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 LRRC46Q96FV0 321 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 SLC35A4Q96G79 324 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 KXD1Q9BQD3 176 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 PRSS27Q9BQR3 290 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 SLC19A3Q9BZV2 496 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 SRMSQ9H3Y6 488 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 FGF22Q9HCT0 170 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 SLC7A7Q9UM01 511 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 FOXJ3Q9UPW0 622 aa9.82□□□□□ -0.84
MTHFD1-210ENST00000555252 RFPL4AA6NLU0 287 aa9.81□□□□□ -0.84
MTHFD1-210ENST00000555252 RFPL4AL1F8VTS6 287 aa9.81□□□□□ -0.84
MTHFD1-210ENST00000555252 FRS3O43559 492 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms