RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ASF1AQ9Y294 204 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF256Q9Y2P7 627 aaPredicted RBP3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ASB3Q9Y575 518 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF318Q5VUA4 2279 aa3.82□□□□□ -1.8
CKS1BP1-201ENST00000555221 CFAP43Q8NDM7 1665 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 RTEL1-TNFRSF6BF6WH68 1400 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 MYOM3Q5VTT5 1437 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 PLEKHH1Q9ULM0 1364 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 LOC110117498-PIK3R3F6TDL0 507 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF780AO75290 641 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 KLK3P07288 261 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 NPR2P20594 1047 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 ATP6V1B2P21281 511 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 DDOSTP39656 456 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 KIR2DS4P43632 304 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 HLCSP50747 726 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 SEC61GP60059 68 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 SELENOTP62341 195 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 DDX39BQ13838 428 aaKnown RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 DUSP7Q16829 419 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 CCDC14Q49A88 953 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 CARD16Q5EG05 197 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 PHYHD1Q5SRE7 291 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 OTPQ5XKR4 325 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 TIGD3Q6B0B8 471 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 DHDDSQ86SQ9 333 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 TRIM69Q86WT6 500 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 NBPF5PQ86XG9 351 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 C11orf53Q8IXP5 236 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 RDH10Q8IZV5 341 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR10G3Q8NGC4 313 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR51S1Q8NGJ8 323 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR8J1Q8NGP2 316 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 FRAT1Q92837 279 aaPredicted RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 UFD1Q92890 307 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 IMMP1LQ96LU5 166 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 AZI2Q9H6S1 392 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 AIG1Q9NVV5 245 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 THUMPD1Q9NXG2 353 aaKnown RBP3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 KIF25Q9UIL4 384 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 CDH10Q9Y6N8 788 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 KIF14Q15058 1648 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 ABCA9Q8IUA7 1624 aa3.81□□□□□ -1.8
CKS1BP1-201ENST00000555221 CFAP74Q9C0B2 1584 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 ARHGAP5Q13017 1502 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 ATP10AO60312 1499 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 LRRC9Q6ZRR7 1453 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 ATRXP46100 2492 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 A0A0J9YXY3 114 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 A0A1B0GVL5 298 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 A8MU10 97 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 EMC8O43402 210 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 ACTL6AO96019 429 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 KLK7P49862 253 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 GPM6AP51674 278 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 KPNA2P52292 529 aaKnown RBP3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 APOC4P55056 127 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 CDK16Q00536 496 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 TLE4Q04727 773 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR2G6Q5TZ20 316 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR2A2Q6IF42 318 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF571Q7Z3V5 609 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR52H1Q8NGJ2 320 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 FGF11Q92914 225 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 NT5C3BQ969T7 300 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 SLC25A22Q9H936 323 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 PLSCR3Q9NRY6 295 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 N6AMT1Q9Y5N5 214 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 NPTNQ9Y639 398 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 KDM6BO15054 1643 aa3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 GPATCH8Q9UKJ3 1502 aaKnown RBP3.8□□□□□ -1.8
CKS1BP1-201ENST00000555221 MLH3Q9UHC1 1453 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ANKRD30AQ9BXX3 1397 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 IGKV1D-8A0A087WSZ0 117 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 A0A0U1RQS6 177 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 FAM231BA6NCW3 169 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 A6NIZ1 184 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR52A4PA6NMU1 304 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 H0Y8G0 127 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ABCD4O14678 606 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 MBTPS2O43462 519 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 IGLV1-47P01700 117 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 CD1EP15812 388 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF19P17023 458 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 NCF2P19878 526 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 MX1P20591 662 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 COX7A1P24310 79 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 OPRD1P41143 372 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 SULT1E1P49888 294 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 RAP1BP61224 184 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 CTSL3PQ5NE16 218 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 H2BFWTQ7Z2G1 175 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 NUDCD3Q8IVD9 361 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 ZNF740Q8NDX6 193 aa3.79□□□□□ -1.8
CKS1BP1-201ENST00000555221 OR1L4Q8NGR5 311 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms